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A complete assembly of the rice Nipponbare reference genome.
Shang L, He W, Wang T, Yang Y, Xu Q, Zhao X, Yang L, Zhang H, Li X, Lv Y, Chen W, Cao S, Wang X, Zhang B, Liu X, Yu X, He H, Wei H, Leng Y, Shi C, Guo M, Zhang Z, Zhang B, Yuan Q, Qian H, Cao X, Cui Y, Zhang Q, Dai X, Liu C, Guo L, Zhou Y, Zheng X, Ruan J, Cheng Z, Pan W, Qian Q. Shang L, et al. Among authors: ruan j. Mol Plant. 2023 Aug 7;16(8):1232-1236. doi: 10.1016/j.molp.2023.08.003. Epub 2023 Aug 7. Mol Plant. 2023. PMID: 37553831 Free article. No abstract available.
En Route to Completion: What Is An Ideal Reference Genome?
Pan W, Ruan J. Pan W, et al. Among authors: ruan j. Genomics Proteomics Bioinformatics. 2022 Feb;20(1):1-3. doi: 10.1016/j.gpb.2021.09.001. Epub 2021 Sep 9. Genomics Proteomics Bioinformatics. 2022. PMID: 34509700 Free PMC article. No abstract available.
The First High-quality Reference Genome of Sika Deer Provides Insights into High-tannin Adaptation.
Xing X, Ai C, Wang T, Li Y, Liu H, Hu P, Wang G, Liu H, Wang H, Zhang R, Zheng J, Wang X, Wang L, Chang Y, Qian Q, Yu J, Tang L, Wu S, Shao X, Li A, Cui P, Zhan W, Zhao S, Wu Z, Shao X, Dong Y, Rong M, Tan Y, Cui X, Chang S, Song X, Yang T, Sun L, Ju Y, Zhao P, Fan H, Liu Y, Wang X, Yang W, Yang M, Wei T, Song S, Xu J, Yue Z, Liang Q, Li C, Ruan J, Yang F. Xing X, et al. Among authors: ruan j. Genomics Proteomics Bioinformatics. 2023 Feb;21(1):203-215. doi: 10.1016/j.gpb.2022.05.008. Epub 2022 Jun 16. Genomics Proteomics Bioinformatics. 2023. PMID: 35718271 Free PMC article.
A super pan-genomic landscape of rice.
Shang L, Li X, He H, Yuan Q, Song Y, Wei Z, Lin H, Hu M, Zhao F, Zhang C, Li Y, Gao H, Wang T, Liu X, Zhang H, Zhang Y, Cao S, Yu X, Zhang B, Zhang Y, Tan Y, Qin M, Ai C, Yang Y, Zhang B, Hu Z, Wang H, Lv Y, Wang Y, Ma J, Wang Q, Lu H, Wu Z, Liu S, Sun Z, Zhang H, Guo L, Li Z, Zhou Y, Li J, Zhu Z, Xiong G, Ruan J, Qian Q. Shang L, et al. Among authors: ruan j. Cell Res. 2022 Oct;32(10):878-896. doi: 10.1038/s41422-022-00685-z. Epub 2022 Jul 12. Cell Res. 2022. PMID: 35821092 Free PMC article.
A rice variation map derived from 10 548 rice accessions reveals the importance of rare variants.
Wang T, He W, Li X, Zhang C, He H, Yuan Q, Zhang B, Zhang H, Leng Y, Wei H, Xu Q, Shi C, Liu X, Guo M, Wang X, Chen W, Zhang Z, Yang L, Lv Y, Qian H, Zhang B, Yu X, Liu C, Cao X, Cui Y, Zhang Q, Dai X, Guo L, Wang Y, Zhou Y, Ruan J, Qian Q, Shang L. Wang T, et al. Among authors: ruan j. Nucleic Acids Res. 2023 Nov 10;51(20):10924-10933. doi: 10.1093/nar/gkad840. Nucleic Acids Res. 2023. PMID: 37843097 Free PMC article.
2,260 results