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A functional microbiome catalog crowdsourced from North American rivers.
Borton MA, McGivern BB, Willi KR, Woodcroft BJ, Mosier AC, Singleton DM, Bambakidis T, Pelly A, Liu F, Edirisinghe JN, Faria JP, Leleiwi I, Daly RA, Goldman AE, Wilkins MJ, Hall EK, Pennacchio C, Roux S, Eloe-Fadrosh EA, Good SP, Sullivan MB, Henry CS, Wood-Charlson EM, Ross MRV, Miller CS, Crump BC, Stegen JC, Wrighton KC. Borton MA, et al. Among authors: roux s. bioRxiv [Preprint]. 2023 Jul 26:2023.07.22.550117. doi: 10.1101/2023.07.22.550117. bioRxiv. 2023. PMID: 37502915 Free PMC article. Preprint.
Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales.
Borton MA, Hoyt DW, Roux S, Daly RA, Welch SA, Nicora CD, Purvine S, Eder EK, Hanson AJ, Sheets JM, Morgan DM, Wolfe RA, Sharma S, Carr TR, Cole DR, Mouser PJ, Lipton MS, Wilkins MJ, Wrighton KC. Borton MA, et al. Among authors: roux s. Proc Natl Acad Sci U S A. 2018 Jul 10;115(28):E6585-E6594. doi: 10.1073/pnas.1800155115. Epub 2018 Jun 25. Proc Natl Acad Sci U S A. 2018. PMID: 29941576 Free PMC article.
Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing.
Trubl G, Jang HB, Roux S, Emerson JB, Solonenko N, Vik DR, Solden L, Ellenbogen J, Runyon AT, Bolduc B, Woodcroft BJ, Saleska SR, Tyson GW, Wrighton KC, Sullivan MB, Rich VI. Trubl G, et al. Among authors: roux s. mSystems. 2018 Oct 2;3(5):e00076-18. doi: 10.1128/mSystems.00076-18. eCollection 2018 Sep-Oct. mSystems. 2018. PMID: 30320215 Free PMC article.
Because of the challenges of recovering viruses from soils, little is known about soil viruses or their role(s) in microbial biogeochemical cycling. Here, we describe 53 viral populations (viral operational taxonomic units [vOTUs]) recovered from seven quantitatively deriv …
Because of the challenges of recovering viruses from soils, little is known about soil viruses or their role(s) in microbial biogeoch …
Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem.
Solden LM, Naas AE, Roux S, Daly RA, Collins WB, Nicora CD, Purvine SO, Hoyt DW, Schückel J, Jørgensen B, Willats W, Spalinger DE, Firkins JL, Lipton MS, Sullivan MB, Pope PB, Wrighton KC. Solden LM, et al. Among authors: roux s. Nat Microbiol. 2018 Nov;3(11):1274-1284. doi: 10.1038/s41564-018-0225-4. Epub 2018 Oct 24. Nat Microbiol. 2018. PMID: 30356154 Free PMC article.
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes.
Roux S, Krupovic M, Daly RA, Borges AL, Nayfach S, Schulz F, Sharrar A, Matheus Carnevali PB, Cheng JF, Ivanova NN, Bondy-Denomy J, Wrighton KC, Woyke T, Visel A, Kyrpides NC, Eloe-Fadrosh EA. Roux S, et al. Nat Microbiol. 2019 Nov;4(11):1895-1906. doi: 10.1038/s41564-019-0510-x. Epub 2019 Jul 22. Nat Microbiol. 2019. PMID: 31332386 Free PMC article.
1,118 results