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The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole.
Martin K, Schmidt K, Toseland A, Boulton CA, Barry K, Beszteri B, Brussaard CPD, Clum A, Daum CG, Eloe-Fadrosh E, Fong A, Foster B, Foster B, Ginzburg M, Huntemann M, Ivanova NN, Kyrpides NC, Lindquist E, Mukherjee S, Palaniappan K, Reddy TBK, Rizkallah MR, Roux S, Timmermans K, Tringe SG, van de Poll WH, Varghese N, Valentin KU, Lenton TM, Grigoriev IV, Leggett RM, Moulton V, Mock T. Martin K, et al. Among authors: roux s. Nat Commun. 2021 Sep 16;12(1):5483. doi: 10.1038/s41467-021-25646-9. Nat Commun. 2021. PMID: 34531387 Free PMC article.
Genomic variation and biogeography of Antarctic haloarchaea.
Tschitschko B, Erdmann S, DeMaere MZ, Roux S, Panwar P, Allen MA, Williams TJ, Brazendale S, Hancock AM, Eloe-Fadrosh EA, Cavicchioli R. Tschitschko B, et al. Among authors: roux s. Microbiome. 2018 Jun 20;6(1):113. doi: 10.1186/s40168-018-0495-3. Microbiome. 2018. PMID: 29925429 Free PMC article.
Host-linked soil viral ecology along a permafrost thaw gradient.
Emerson JB, Roux S, Brum JR, Bolduc B, Woodcroft BJ, Jang HB, Singleton CM, Solden LM, Naas AE, Boyd JA, Hodgkins SB, Wilson RM, Trubl G, Li C, Frolking S, Pope PB, Wrighton KC, Crill PM, Chanton JP, Saleska SR, Tyson GW, Rich VI, Sullivan MB. Emerson JB, et al. Among authors: roux s. Nat Microbiol. 2018 Aug;3(8):870-880. doi: 10.1038/s41564-018-0190-y. Epub 2018 Jul 16. Nat Microbiol. 2018. PMID: 30013236 Free PMC article.
Minimum Information about an Uncultivated Virus Genome (MIUViG).
Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, Krupovic M, Kuhn JH, Lavigne R, Brister JR, Varsani A, Amid C, Aziz RK, Bordenstein SR, Bork P, Breitbart M, Cochrane GR, Daly RA, Desnues C, Duhaime MB, Emerson JB, Enault F, Fuhrman JA, Hingamp P, Hugenholtz P, Hurwitz BL, Ivanova NN, Labonté JM, Lee KB, Malmstrom RR, Martinez-Garcia M, Mizrachi IK, Ogata H, Páez-Espino D, Petit MA, Putonti C, Rattei T, Reyes A, Rodriguez-Valera F, Rosario K, Schriml L, Schulz F, Steward GF, Sullivan MB, Sunagawa S, Suttle CA, Temperton B, Tringe SG, Thurber RV, Webster NS, Whiteson KL, Wilhelm SW, Wommack KE, Woyke T, Wrighton KC, Yilmaz P, Yoshida T, Young MJ, Yutin N, Allen LZ, Kyrpides NC, Eloe-Fadrosh EA. Roux S, et al. Nat Biotechnol. 2019 Jan;37(1):29-37. doi: 10.1038/nbt.4306. Epub 2018 Dec 17. Nat Biotechnol. 2019. PMID: 30556814 Free PMC article.
Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom.
Nowinski B, Smith CB, Thomas CM, Esson K, Marin R 3rd, Preston CM, Birch JM, Scholin CA, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Glavina Del Rio T, Whitman WB, Kiene RP, Eloe-Fadrosh EA, Moran MA. Nowinski B, et al. Among authors: roux s. Sci Data. 2019 Jul 22;6(1):129. doi: 10.1038/s41597-019-0132-4. Sci Data. 2019. PMID: 31332186 Free PMC article.
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes.
Roux S, Krupovic M, Daly RA, Borges AL, Nayfach S, Schulz F, Sharrar A, Matheus Carnevali PB, Cheng JF, Ivanova NN, Bondy-Denomy J, Wrighton KC, Woyke T, Visel A, Kyrpides NC, Eloe-Fadrosh EA. Roux S, et al. Nat Microbiol. 2019 Nov;4(11):1895-1906. doi: 10.1038/s41564-019-0510-x. Epub 2019 Jul 22. Nat Microbiol. 2019. PMID: 31332386 Free PMC article.
Microbiomes of Velloziaceae from phosphorus-impoverished soils of the campos rupestres, a biodiversity hotspot.
Camargo AP, de Souza RSC, de Britto Costa P, Gerhardt IR, Dante RA, Teodoro GS, Abrahão A, Lambers H, Carazzolle MF, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Pennacchio C, Eloe-Fadrosh EA, Arruda P, Oliveira RS. Camargo AP, et al. Among authors: roux s. Sci Data. 2019 Jul 31;6(1):140. doi: 10.1038/s41597-019-0141-3. Sci Data. 2019. PMID: 31366912 Free PMC article.
1,118 results