Rost B - Search Results

1

SETH predicts nuances of residue disorder from protein embeddings.

Ilzhöfer D, Heinzinger M, Rost B. Ilzhöfer D, et al. Among authors: rost b. Front Bioinform. 2022 Oct 10;2:1019597. doi: 10.3389/fbinf.2022.1019597. eCollection 2022. Front Bioinform. 2022. PMID: 36304335 Free PMC article.

2

LambdaPP: Fast and accessible protein-specific phenotype predictions.

Olenyi T, Marquet C, Heinzinger M, Kröger B, Nikolova T, Bernhofer M, Sändig P, Schütze K, Littmann M, Mirdita M, Steinegger M, Dallago C, Rost B. Olenyi T, et al. Among authors: rost b. Protein Sci. 2023 Jan;32(1):e4524. doi: 10.1002/pro.4524. Protein Sci. 2023. PMID: 36454227 Free PMC article.

3

Nearest neighbor search on embeddings rapidly identifies distant protein relations.

Schütze K, Heinzinger M, Steinegger M, Rost B. Schütze K, et al. Among authors: rost b. Front Bioinform. 2022 Nov 17;2:1033775. doi: 10.3389/fbinf.2022.1033775. eCollection 2022. Front Bioinform. 2022. PMID: 36466147 Free PMC article.

4

Novel machine learning approaches revolutionize protein knowledge.

Bordin N, Dallago C, Heinzinger M, Kim S, Littmann M, Rauer C, Steinegger M, Rost B, Orengo C. Bordin N, et al. Among authors: rost b. Trends Biochem Sci. 2023 Apr;48(4):345-359. doi: 10.1016/j.tibs.2022.11.001. Epub 2022 Dec 9. Trends Biochem Sci. 2023. PMID: 36504138 Free PMC article. Review.

5

Light attention predicts protein location from the language of life.

Stärk H, Dallago C, Heinzinger M, Rost B. Stärk H, et al. Among authors: rost b. Bioinform Adv. 2021 Nov 19;1(1):vbab035. doi: 10.1093/bioadv/vbab035. eCollection 2021. Bioinform Adv. 2021. PMID: 36700108 Free PMC article.

6

AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms.

Bordin N, Sillitoe I, Nallapareddy V, Rauer C, Lam SD, Waman VP, Sen N, Heinzinger M, Littmann M, Kim S, Velankar S, Steinegger M, Rost B, Orengo C. Bordin N, et al. Among authors: rost b. Commun Biol. 2023 Feb 8;6(1):160. doi: 10.1038/s42003-023-04488-9. Commun Biol. 2023. PMID: 36755055 Free PMC article.

7

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins.

Del Conte A, Bouhraoua A, Mehdiabadi M, Clementel D, Monzon AM; CAID predictors; Tosatto SCE, Piovesan D. Del Conte A, et al. Nucleic Acids Res. 2023 Jul 5;51(W1):W62-W69. doi: 10.1093/nar/gkad430. Nucleic Acids Res. 2023. PMID: 37246642 Free PMC article.

8

Rendering protein mutation movies with MutAmore.

Weissenow K, Rost B. Weissenow K, et al. Among authors: rost b. BMC Bioinformatics. 2023 Dec 12;24(1):469. doi: 10.1186/s12859-023-05610-8. BMC Bioinformatics. 2023. PMID: 38087198 Free PMC article.

9

Alignment-based Protein Mutational Landscape Prediction: Doing More with Less.

Abakarova M, Marquet C, Rera M, Rost B, Laine E. Abakarova M, et al. Among authors: rost b. Genome Biol Evol. 2023 Nov 1;15(11):evad201. doi: 10.1093/gbe/evad201. Genome Biol Evol. 2023. PMID: 37936309 Free PMC article.

10

The importance of planning CT-based imaging features for machine learning-based prediction of pain response.

Llorián-Salvador Ó, Akhgar J, Pigorsch S, Borm K, Münch S, Bernhardt D, Rost B, Andrade-Navarro MA, Combs SE, Peeken JC. Llorián-Salvador Ó, et al. Among authors: rost b. Sci Rep. 2023 Oct 13;13(1):17427. doi: 10.1038/s41598-023-43768-6. Sci Rep. 2023. PMID: 37833283 Free PMC article.

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