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103 results

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De novo assembly of the cattle reference genome with single-molecule sequencing.
Rosen BD, Bickhart DM, Schnabel RD, Koren S, Elsik CG, Tseng E, Rowan TN, Low WY, Zimin A, Couldrey C, Hall R, Li W, Rhie A, Ghurye J, McKay SD, Thibaud-Nissen F, Hoffman J, Murdoch BM, Snelling WM, McDaneld TG, Hammond JA, Schwartz JC, Nandolo W, Hagen DE, Dreischer C, Schultheiss SJ, Schroeder SG, Phillippy AM, Cole JB, Van Tassell CP, Liu G, Smith TPL, Medrano JF. Rosen BD, et al. Gigascience. 2020 Mar 1;9(3):giaa021. doi: 10.1093/gigascience/giaa021. Gigascience. 2020. PMID: 32191811 Free PMC article.
Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus.
Zhou Y, Utsunomiya YT, Xu L, Hay el HA, Bickhart DM, Alexandre PA, Rosen BD, Schroeder SG, Carvalheiro R, de Rezende Neves HH, Sonstegard TS, Van Tassell CP, Ferraz JB, Fukumasu H, Garcia JF, Liu GE. Zhou Y, et al. Among authors: rosen bd. BMC Genomics. 2016 Jun 1;17:419. doi: 10.1186/s12864-016-2461-4. BMC Genomics. 2016. PMID: 27245577 Free PMC article.
Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome.
Bickhart DM, Rosen BD, Koren S, Sayre BL, Hastie AR, Chan S, Lee J, Lam ET, Liachko I, Sullivan ST, Burton JN, Huson HJ, Nystrom JC, Kelley CM, Hutchison JL, Zhou Y, Sun J, Crisà A, Ponce de León FA, Schwartz JC, Hammond JA, Waldbieser GC, Schroeder SG, Liu GE, Dunham MJ, Shendure J, Sonstegard TS, Phillippy AM, Van Tassell CP, Smith TP. Bickhart DM, et al. Among authors: rosen bd. Nat Genet. 2017 Apr;49(4):643-650. doi: 10.1038/ng.3802. Epub 2017 Mar 6. Nat Genet. 2017. PMID: 28263316 Free PMC article.
Misidentification of runs of homozygosity islands in cattle caused by interference with copy number variation or large intermarker distances.
Nandolo W, Utsunomiya YT, Mészáros G, Wurzinger M, Khayadzadeh N, Torrecilha RBP, Mulindwa HA, Gondwe TN, Waldmann P, Ferenčaković M, Garcia JF, Rosen BD, Bickhart D, van Tassell CP, Curik I, Sölkner J. Nandolo W, et al. Among authors: rosen bd. Genet Sel Evol. 2018 Aug 22;50(1):43. doi: 10.1186/s12711-018-0414-x. Genet Sel Evol. 2018. PMID: 30134820 Free PMC article.
Diversity of copy number variation in the worldwide goat population.
Liu M, Zhou Y, Rosen BD, Van Tassell CP, Stella A, Tosser-Klopp G, Rupp R, Palhière I, Colli L, Sayre B, Crepaldi P, Fang L, Mészáros G, Chen H, Liu GE; ADAPTmap Consortium. Liu M, et al. Among authors: rosen bd. Heredity (Edinb). 2019 May;122(5):636-646. doi: 10.1038/s41437-018-0150-6. Epub 2018 Nov 6. Heredity (Edinb). 2019. PMID: 30401973 Free PMC article.
Signatures of selection and environmental adaptation across the goat genome post-domestication.
Bertolini F, Servin B, Talenti A, Rochat E, Kim ES, Oget C, Palhière I, Crisà A, Catillo G, Steri R, Amills M, Colli L, Marras G, Milanesi M, Nicolazzi E, Rosen BD, Van Tassell CP, Guldbrandtsen B, Sonstegard TS, Tosser-Klopp G, Stella A, Rothschild MF, Joost S, Crepaldi P; AdaptMap consortium. Bertolini F, et al. Among authors: rosen bd. Genet Sel Evol. 2018 Nov 19;50(1):57. doi: 10.1186/s12711-018-0421-y. Genet Sel Evol. 2018. PMID: 30449276 Free PMC article.
AdaptMap: exploring goat diversity and adaptation.
Stella A, Nicolazzi EL, Van Tassell CP, Rothschild MF, Colli L, Rosen BD, Sonstegard TS, Crepaldi P, Tosser-Klopp G, Joost S; AdaptMap Consortium. Stella A, et al. Among authors: rosen bd. Genet Sel Evol. 2018 Nov 19;50(1):61. doi: 10.1186/s12711-018-0427-5. Genet Sel Evol. 2018. PMID: 30453882 Free PMC article. No abstract available.
103 results