Rinaldi S - Search Results

1

Disulfide Bond Mimetics: Strategies and Challenges.

Gori A, Gagni P, Rinaldi S. Gori A, et al. Among authors: rinaldi s. Chemistry. 2017 Oct 26;23(60):14987-14995. doi: 10.1002/chem.201703199. Epub 2017 Aug 23. Chemistry. 2017. PMID: 28749012 Review.

2

Unraveling Energy and Dynamics Determinants to Interpret Protein Functional Plasticity: The Limonene-1,2-epoxide-hydrolase Case Study.

Rinaldi S, Gori A, Annovazzi C, Ferrandi EE, Monti D, Colombo G. Rinaldi S, et al. J Chem Inf Model. 2017 Apr 24;57(4):717-725. doi: 10.1021/acs.jcim.6b00504. Epub 2017 Mar 29. J Chem Inf Model. 2017. PMID: 28298080

3

Allosteric Modulators of HSP90 and HSP70: Dynamics Meets Function through Structure-Based Drug Design.

Ferraro M, D'Annessa I, Moroni E, Morra G, Paladino A, Rinaldi S, Compostella F, Colombo G. Ferraro M, et al. Among authors: rinaldi s. J Med Chem. 2019 Jan 10;62(1):60-87. doi: 10.1021/acs.jmedchem.8b00825. Epub 2018 Aug 9. J Med Chem. 2019. PMID: 30048133 Free article. Review.

4

Frontiers and Challenges of Computing ncRNAs Biogenesis, Function and Modulation.

Rinaldi S, Moroni E, Rozza R, Magistrato A. Rinaldi S, et al. J Chem Theory Comput. 2024 Feb 13;20(3):993-1018. doi: 10.1021/acs.jctc.3c01239. Epub 2024 Jan 30. J Chem Theory Comput. 2024. PMID: 38287883 Review.

5

Machine Learning of Allosteric Effects: The Analysis of Ligand-Induced Dynamics to Predict Functional Effects in TRAP1.

Ferraro M, Moroni E, Ippoliti E, Rinaldi S, Sanchez-Martin C, Rasola A, Pavarino LF, Colombo G. Ferraro M, et al. Among authors: rinaldi s. J Phys Chem B. 2021 Jan 14;125(1):101-114. doi: 10.1021/acs.jpcb.0c09742. Epub 2020 Dec 28. J Phys Chem B. 2021. PMID: 33369425 Free PMC article.

6

A Local Allosteric Network in Heat Shock Protein 70 (Hsp70) Links Inhibitor Binding to Enzyme Activity and Distal Protein-Protein Interactions.

Rinaldi S, Assimon VA, Young ZT, Morra G, Shao H, Taylor IR, Gestwicki JE, Colombo G. Rinaldi S, et al. ACS Chem Biol. 2018 Nov 16;13(11):3142-3152. doi: 10.1021/acschembio.8b00712. Epub 2018 Nov 8. ACS Chem Biol. 2018. PMID: 30372610 Free PMC article.

7

Mechanistic Model for the Hsp90-Driven Opening of Human Argonaute.

Rinaldi S, Colombo G, Paladino A. Rinaldi S, et al. J Chem Inf Model. 2020 Mar 23;60(3):1469-1480. doi: 10.1021/acs.jcim.0c00053. Epub 2020 Mar 3. J Chem Inf Model. 2020. PMID: 32096993 Free PMC article.

8

Setup and Validation of a Reliable Docking Protocol for the Development of Neuroprotective Agents by Targeting the Sigma-1 Receptor (S1R).

Rossino G, Rui M, Pozzetti L, Schepmann D, Wünsch B, Zampieri D, Pellavio G, Laforenza U, Rinaldi S, Colombo G, Morelli L, Linciano P, Rossi D, Collina S. Rossino G, et al. Among authors: rinaldi s. Int J Mol Sci. 2020 Oct 18;21(20):7708. doi: 10.3390/ijms21207708. Int J Mol Sci. 2020. PMID: 33081037 Free PMC article.

9

Tryptophan scanning mutagenesis as a way to mimic the compound-bound state and probe the selectivity of allosteric inhibitors in cells.

Taylor IR, Assimon VA, Kuo SY, Rinaldi S, Li X, Young ZT, Morra G, Green K, Nguyen D, Shao H, Garneau-Tsodikova S, Colombo G, Gestwicki JE. Taylor IR, et al. Among authors: rinaldi s. Chem Sci. 2020 Jan 10;11(7):1892-1904. doi: 10.1039/c9sc04284a. Chem Sci. 2020. PMID: 34123282 Free PMC article.

10

The dynamics of t1 adenosine binding on human Argonaute 2: Understanding recognition with conformational selection.

Rinaldi S, Colombo G, Paladino A. Rinaldi S, et al. Protein Sci. 2022 Aug;31(8):e4377. doi: 10.1002/pro.4377. Protein Sci. 2022. PMID: 35900022 Free PMC article.

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