Riffle M - Search Results

1

Riffle M, Eng JK. Riffle M, et al. Proteomics. 2009 Oct;9(20):4653-63. doi: 10.1002/pmic.200900216. Proteomics. 2009. PMID: 19795424 Free PMC article. Review.

2

The Yeast Resource Center Public Data Repository.

Riffle M, Malmström L, Davis TN. Riffle M, et al. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D378-82. doi: 10.1093/nar/gki073. Nucleic Acids Res. 2005. PMID: 15608220 Free PMC article.

3

The Yeast Resource Center Public Image Repository: A large database of fluorescence microscopy images.

Riffle M, Davis TN. Riffle M, et al. BMC Bioinformatics. 2010 May 19;11:263. doi: 10.1186/1471-2105-11-263. BMC Bioinformatics. 2010. PMID: 20482811 Free PMC article.

4

A mass spectrometry proteomics data management platform.

Sharma V, Eng JK, Maccoss MJ, Riffle M. Sharma V, et al. Among authors: riffle m. Mol Cell Proteomics. 2012 Sep;11(9):824-31. doi: 10.1074/mcp.O111.015149. Epub 2012 May 18. Mol Cell Proteomics. 2012. PMID: 22611296 Free PMC article.

5

Determining protein complex structures based on a Bayesian model of in vivo Förster resonance energy transfer (FRET) data.

Bonomi M, Pellarin R, Kim SJ, Russel D, Sundin BA, Riffle M, Jaschob D, Ramsden R, Davis TN, Muller EG, Sali A. Bonomi M, et al. Among authors: riffle m. Mol Cell Proteomics. 2014 Nov;13(11):2812-23. doi: 10.1074/mcp.M114.040824. Epub 2014 Aug 19. Mol Cell Proteomics. 2014. PMID: 25139910 Free PMC article.

6

Integrated RNA- and protein profiling of fermentation and respiration in diploid budding yeast provides insight into nutrient control of cell growth and development.

Becker E, Liu Y, Lardenois A, Walther T, Horecka J, Stuparevic I, Law MJ, Lavigne R, Evrard B, Demougin P, Riffle M, Strich R, Davis RW, Pineau C, Primig M. Becker E, et al. Among authors: riffle m. J Proteomics. 2015 Apr 24;119:30-44. doi: 10.1016/j.jprot.2015.01.015. Epub 2015 Feb 4. J Proteomics. 2015. PMID: 25662576 Free PMC article.

7

Visualization and dissemination of multidimensional proteomics data comparing protein abundance during Caenorhabditis elegans development.

Riffle M, Merrihew GE, Jaschob D, Sharma V, Davis TN, Noble WS, MacCoss MJ. Riffle M, et al. J Am Soc Mass Spectrom. 2015 Nov;26(11):1827-36. doi: 10.1007/s13361-015-1193-z. Epub 2015 Jul 2. J Am Soc Mass Spectrom. 2015. PMID: 26133526 Free PMC article.

8

ProXL (Protein Cross-Linking Database): A Platform for Analysis, Visualization, and Sharing of Protein Cross-Linking Mass Spectrometry Data.

Riffle M, Jaschob D, Zelter A, Davis TN. Riffle M, et al. J Proteome Res. 2016 Aug 5;15(8):2863-70. doi: 10.1021/acs.jproteome.6b00274. Epub 2016 Jun 24. J Proteome Res. 2016. PMID: 27302480 Free PMC article.

9

Improved Analysis of Cross-Linking Mass Spectrometry Data with Kojak 2.0, Advanced by Integration into the Trans-Proteomic Pipeline.

Hoopmann MR, Shteynberg DD, Zelter A, Riffle M, Lyon AS, Agard DA, Luan Q, Nolen BJ, MacCoss MJ, Davis TN, Moritz RL. Hoopmann MR, et al. Among authors: riffle m. J Proteome Res. 2023 Feb 3;22(2):647-655. doi: 10.1021/acs.jproteome.2c00670. Epub 2023 Jan 11. J Proteome Res. 2023. PMID: 36629399 Free PMC article.

10

Assigning function to yeast proteins by integration of technologies.

Hazbun TR, Malmström L, Anderson S, Graczyk BJ, Fox B, Riffle M, Sundin BA, Aranda JD, McDonald WH, Chiu CH, Snydsman BE, Bradley P, Muller EG, Fields S, Baker D, Yates JR 3rd, Davis TN. Hazbun TR, et al. Among authors: riffle m. Mol Cell. 2003 Dec;12(6):1353-65. doi: 10.1016/s1097-2765(03)00476-3. Mol Cell. 2003. PMID: 14690591 Free article.

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