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Genomic context sensitizes regulatory elements to genetic disruption.
Ordoñez R, Zhang W, Ellis G, Zhu Y, Ashe HJ, Ribeiro-Dos-Santos AM, Brosh R, Huang E, Hogan MS, Boeke JD, Maurano MT. Ordoñez R, et al. Among authors: ribeiro dos santos am. Mol Cell. 2024 May 16;84(10):1842-1854.e7. doi: 10.1016/j.molcel.2024.04.013. Mol Cell. 2024. PMID: 38759624
Packaging and containerization of computational methods.
Alser M, Lawlor B, Abdill RJ, Waymost S, Ayyala R, Rajkumar N, LaPierre N, Brito J, Ribeiro-Dos-Santos AM, Almadhoun N, Sarwal V, Firtina C, Osinski T, Eskin E, Hu Q, Strong D, Kim BBD, Abedalthagafi MS, Mutlu O, Mangul S. Alser M, et al. Among authors: ribeiro dos santos am. Nat Protoc. 2024 Apr 2. doi: 10.1038/s41596-024-00986-0. Online ahead of print. Nat Protoc. 2024. PMID: 38565959 Review.
Molecular Profile of Variants Potentially Associated with Severe Forms of COVID-19 in Amazonian Indigenous Populations.
Coelho RCC, Martins CLELP, Pastana LF, Rodrigues JCG, Aguiar KEC, Cohen-Paes AN, Gellen LPA, Moraes FCA, Calderaro MCL, de Assunção LA, Monte N, Pereira EEB, Ribeiro-Dos-Santos AM, Ribeiro-do-Santos Â, Rodriguez Burbano RM, de Souza SJ, Guerreiro JF, Assumpção PP, Santos SEBD, Fernandes MR, Santos NPCD. Coelho RCC, et al. Among authors: ribeiro dos santos am. Viruses. 2024 Feb 26;16(3):359. doi: 10.3390/v16030359. Viruses. 2024. PMID: 38543725 Free PMC article.
Genomic investigation on genes related to mercury metabolism in Amazonian indigenous populations.
Carvalho VHV, Rodrigues JCG, Vinagre LWMS, Pereira EEB, Monte N, Fernandes MR, Ribeiro-Dos-Santos AM, Guerreiro JF, Ribeiro-Dos-Santos Â, Dos Santos SEB, Dos Santos NPC. Carvalho VHV, et al. Among authors: ribeiro dos santos am. Sci Total Environ. 2024 May 1;923:171232. doi: 10.1016/j.scitotenv.2024.171232. Epub 2024 Feb 23. Sci Total Environ. 2024. PMID: 38402986
Mouse genome rewriting and tailoring of three important disease loci.
Zhang W, Golynker I, Brosh R, Fajardo A, Zhu Y, Wudzinska AM, Ordoñez R, Ribeiro-Dos-Santos AM, Carrau L, Damani-Yokota P, Yeung ST, Khairallah C, Vela Gartner A, Chalhoub N, Huang E, Ashe HJ, Khanna KM, Maurano MT, Kim SY, tenOever BR, Boeke JD. Zhang W, et al. Among authors: ribeiro dos santos am. Nature. 2023 Nov;623(7986):423-431. doi: 10.1038/s41586-023-06675-4. Epub 2023 Nov 1. Nature. 2023. PMID: 37914927 Free PMC article.
Genomic context sensitizes regulatory elements to genetic disruption.
Ordoñez R, Zhang W, Ellis G, Zhu Y, Ashe HJ, Ribeiro-Dos-Santos AM, Brosh R, Huang E, Hogan MS, Boeke JD, Maurano MT. Ordoñez R, et al. Among authors: ribeiro dos santos am. bioRxiv [Preprint]. 2024 Mar 12:2023.07.02.547201. doi: 10.1101/2023.07.02.547201. bioRxiv. 2024. PMID: 37781588 Free PMC article. Preprint.
Molecular Profile of Variants in CDH1, TP53, PSCA, PRKAA1, and TTN Genes Related to Gastric Cancer Susceptibility in Amazonian Indigenous Populations.
Aguiar KEC, Oliveira IS, Cohen-Paes AN, Coelho RCC, Vinagre LWMS, Rodrigues JCG, Ribeiro-Dos-Santos AM, De Souza SJ, Ribeiro-Dos-Santos Â, Guerreiro JF, Assumpção PP, Santos SEBD, Santos NPCD, Fernandes MR. Aguiar KEC, et al. Among authors: ribeiro dos santos am. J Pers Med. 2023 Sep 8;13(9):1364. doi: 10.3390/jpm13091364. J Pers Med. 2023. PMID: 37763132 Free PMC article.
Synthetic regulatory genomics uncovers enhancer context dependence at the Sox2 locus.
Brosh R, Coelho C, Ribeiro-Dos-Santos AM, Ellis G, Hogan MS, Ashe HJ, Somogyi N, Ordoñez R, Luther RD, Huang E, Boeke JD, Maurano MT. Brosh R, et al. Among authors: ribeiro dos santos am. Mol Cell. 2023 Apr 6;83(7):1140-1152.e7. doi: 10.1016/j.molcel.2023.02.027. Epub 2023 Mar 16. Mol Cell. 2023. PMID: 36931273 Free PMC article.
Incidence of Hereditary Gastric Cancer May Be Much Higher than Reported.
de Assumpção PB, de Assumpção PP, Moreira FC, Ribeiro-Dos-Santos Â, Vidal AF, Magalhães L, Khayat AS, Ribeiro-Dos-Santos AM, Cavalcante GC, Pereira AL, Medeiros I, de Souza SJ, Burbano RMR, de Souza JES, Dos Santos SEB. de Assumpção PB, et al. Among authors: ribeiro dos santos am. Cancers (Basel). 2022 Dec 12;14(24):6125. doi: 10.3390/cancers14246125. Cancers (Basel). 2022. PMID: 36551612 Free PMC article.
Triple-Negative Breast Cancer circRNAome Reveals Hsa_circ_0072309 as a Potential Risk Biomarker.
Magalhães L, Ribeiro-Dos-Santos AM, Cruz RL, Nakamura KDM, Brianese R, Burbano R, Ferreira SP, Oliveira ELF, Anaissi AKM, Nahúm MCS, Demachki S, Vidal AF, Carraro DM, Ribeiro-Dos-Santos Â. Magalhães L, et al. Among authors: ribeiro dos santos am. Cancers (Basel). 2022 Jul 5;14(13):3280. doi: 10.3390/cancers14133280. Cancers (Basel). 2022. PMID: 35805051 Free PMC article.
38 results