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OpenMS - an open-source software framework for mass spectrometry.
Sturm M, Bertsch A, Gröpl C, Hildebrandt A, Hussong R, Lange E, Pfeifer N, Schulz-Trieglaff O, Zerck A, Reinert K, Kohlbacher O. Sturm M, et al. Among authors: reinert k. BMC Bioinformatics. 2008 Mar 26;9:163. doi: 10.1186/1471-2105-9-163. BMC Bioinformatics. 2008. PMID: 18366760 Free PMC article.
TOPP--the OpenMS proteomics pipeline.
Kohlbacher O, Reinert K, Gröpl C, Lange E, Pfeifer N, Schulz-Trieglaff O, Sturm M. Kohlbacher O, et al. Among authors: reinert k. Bioinformatics. 2007 Jan 15;23(2):e191-7. doi: 10.1093/bioinformatics/btl299. Bioinformatics. 2007. PMID: 17237091
Computational quantification of peptides from LC-MS data.
Schulz-Trieglaff O, Hussong R, Gröpl C, Leinenbach A, Hildebrandt A, Huber C, Reinert K. Schulz-Trieglaff O, et al. Among authors: reinert k. J Comput Biol. 2008 Sep;15(7):685-704. doi: 10.1089/cmb.2007.0117. J Comput Biol. 2008. PMID: 18707556
Tools for label-free peptide quantification.
Nahnsen S, Bielow C, Reinert K, Kohlbacher O. Nahnsen S, et al. Among authors: reinert k. Mol Cell Proteomics. 2013 Mar;12(3):549-56. doi: 10.1074/mcp.R112.025163. Epub 2012 Dec 17. Mol Cell Proteomics. 2013. PMID: 23250051 Free PMC article. Review.
OpenMS: a flexible open-source software platform for mass spectrometry data analysis.
Röst HL, Sachsenberg T, Aiche S, Bielow C, Weisser H, Aicheler F, Andreotti S, Ehrlich HC, Gutenbrunner P, Kenar E, Liang X, Nahnsen S, Nilse L, Pfeuffer J, Rosenberger G, Rurik M, Schmitt U, Veit J, Walzer M, Wojnar D, Wolski WE, Schilling O, Choudhary JS, Malmström L, Aebersold R, Reinert K, Kohlbacher O. Röst HL, et al. Among authors: reinert k. Nat Methods. 2016 Aug 30;13(9):741-8. doi: 10.1038/nmeth.3959. Nat Methods. 2016. PMID: 27575624
177 results