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A transcriptomic based deconvolution framework for assessing differentiation stages and drug responses of AML.
Karakaslar EO, Severens JF, Sánchez-López E, van Veelen PA, Zlei M, van Dongen JJM, Otte AM, Halkes CJM, van Balen P, Veelken H, Reinders MJT, Griffioen M, van den Akker EB. Karakaslar EO, et al. Among authors: reinders mjt. NPJ Precis Oncol. 2024 May 18;8(1):105. doi: 10.1038/s41698-024-00596-9. NPJ Precis Oncol. 2024. PMID: 38762545 Free PMC article.
Evaluating the effectiveness of pre-operative diagnosis of ovarian cancer using minimally invasive liquid biopsies by combining serum human epididymis protein 4 and cell-free DNA in patients with an ovarian mass.
Gaillard DHK, Lof P, Sistermans EA, Mokveld T, Horlings HM, Mom CH, Reinders MJT, Amant F, van den Broek D, Wessels LFA, Lok CAR; HE4 Study Group; Study group. Gaillard DHK, et al. Among authors: reinders mjt. Int J Gynecol Cancer. 2024 May 6;34(5):713-721. doi: 10.1136/ijgc-2023-005073. Int J Gynecol Cancer. 2024. PMID: 38388177
Mapping AML heterogeneity - multi-cohort transcriptomic analysis identifies novel clusters and divergent ex-vivo drug responses.
Severens JF, Karakaslar EO, van der Reijden BA, Sánchez-López E, van den Berg RR, Halkes CJM, van Balen P, Veelken H, Reinders MJT, Griffioen M, van den Akker EB. Severens JF, et al. Among authors: reinders mjt. Leukemia. 2024 Apr;38(4):751-761. doi: 10.1038/s41375-024-02137-6. Epub 2024 Feb 15. Leukemia. 2024. PMID: 38360865
scTopoGAN: unsupervised manifold alignment of single-cell data.
Singh A, Biharie K, Reinders MJT, Mahfouz A, Abdelaal T. Singh A, et al. Among authors: reinders mjt. Bioinform Adv. 2023 Nov 24;3(1):vbad171. doi: 10.1093/bioadv/vbad171. eCollection 2023. Bioinform Adv. 2023. PMID: 38075479 Free PMC article.
Machine learning-based biomarker profile derived from 4210 serially measured proteins predicts clinical outcome of patients with heart failure.
de Bakker M, Petersen TB, Rueten-Budde AJ, Akkerhuis KM, Umans VA, Brugts JJ, Germans T, Reinders MJT, Katsikis PD, van der Spek PJ, Ostroff R, She R, Lanfear D, Asselbergs FW, Boersma E, Rizopoulos D, Kardys I. de Bakker M, et al. Among authors: reinders mjt. Eur Heart J Digit Health. 2023 Oct 4;4(6):444-454. doi: 10.1093/ehjdh/ztad056. eCollection 2023 Dec. Eur Heart J Digit Health. 2023. PMID: 38045440 Free PMC article.
Benchmarking variational AutoEncoders on cancer transcriptomics data.
Eltager M, Abdelaal T, Charrout M, Mahfouz A, Reinders MJT, Makrodimitris S. Eltager M, et al. Among authors: reinders mjt. PLoS One. 2023 Oct 5;18(10):e0292126. doi: 10.1371/journal.pone.0292126. eCollection 2023. PLoS One. 2023. PMID: 37796856 Free PMC article.
188 results