Reiche K - Search Results

1

Master and servant: LINC00152 - a STAT3-induced long noncoding RNA regulates STAT3 in a positive feedback in human multiple myeloma.

Binder S, Zipfel I, Friedrich M, Riedel D, Ende S, Kämpf C, Wiedemann K, Buschmann T, Puppel SH, Reiche K, Stadler PF, Horn F. Binder S, et al. Among authors: reiche k. BMC Med Genomics. 2020 Feb 10;13(1):22. doi: 10.1186/s12920-020-0692-3. BMC Med Genomics. 2020. PMID: 32041604 Free PMC article.

2

Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering.

Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R. Will S, et al. Among authors: reiche k. PLoS Comput Biol. 2007 Apr 13;3(4):e65. doi: 10.1371/journal.pcbi.0030065. Epub 2007 Feb 22. PLoS Comput Biol. 2007. PMID: 17432929 Free PMC article.

3

RNAstrand: reading direction of structured RNAs in multiple sequence alignments.

Reiche K, Stadler PF. Reiche K, et al. Algorithms Mol Biol. 2007 May 31;2:6. doi: 10.1186/1748-7188-2-6. Algorithms Mol Biol. 2007. PMID: 17540014 Free PMC article.

4

Structured RNAs in the ENCODE selected regions of the human genome.

Washietl S, Pedersen JS, Korbel JO, Stocsits C, Gruber AR, Hackermüller J, Hertel J, Lindemeyer M, Reiche K, Tanzer A, Ucla C, Wyss C, Antonarakis SE, Denoeud F, Lagarde J, Drenkow J, Kapranov P, Gingeras TR, Guigó R, Snyder M, Gerstein MB, Reymond A, Hofacker IL, Stadler PF. Washietl S, et al. Among authors: reiche k. Genome Res. 2007 Jun;17(6):852-64. doi: 10.1101/gr.5650707. Genome Res. 2007. PMID: 17568003 Free PMC article.

5

Computational RNomics of drosophilids.

Rose D, Hackermüller J, Washietl S, Reiche K, Hertel J, Findeiss S, Stadler PF, Prohaska SJ. Rose D, et al. Among authors: reiche k. BMC Genomics. 2007 Nov 8;8:406. doi: 10.1186/1471-2164-8-406. BMC Genomics. 2007. PMID: 17996037 Free PMC article.

6

NcDNAlign: plausible multiple alignments of non-protein-coding genomic sequences.

Rose D, Hertel J, Reiche K, Stadler PF, Hackermüller J. Rose D, et al. Among authors: reiche k. Genomics. 2008 Jul;92(1):65-74. doi: 10.1016/j.ygeno.2008.04.003. Epub 2008 Jun 3. Genomics. 2008. PMID: 18511233 Free article.

7

Structural profiles of human miRNA families from pairwise clustering.

Kaczkowski B, Torarinsson E, Reiche K, Havgaard JH, Stadler PF, Gorodkin J. Kaczkowski B, et al. Among authors: reiche k. Bioinformatics. 2009 Feb 1;25(3):291-4. doi: 10.1093/bioinformatics/btn628. Epub 2008 Dec 4. Bioinformatics. 2009. PMID: 19059941

8

Duplicated RNA genes in teleost fish genomes.

Rose D, Jöris J, Hackermüller J, Reiche K, Li Q, Stadler PF. Rose D, et al. Among authors: reiche k. J Bioinform Comput Biol. 2008 Dec;6(6):1157-75. doi: 10.1142/s0219720008003886. J Bioinform Comput Biol. 2008. PMID: 19090022

9

The primary transcriptome of the major human pathogen Helicobacter pylori.

Sharma CM, Hoffmann S, Darfeuille F, Reignier J, Findeiss S, Sittka A, Chabas S, Reiche K, Hackermüller J, Reinhardt R, Stadler PF, Vogel J. Sharma CM, et al. Among authors: reiche k. Nature. 2010 Mar 11;464(7286):250-5. doi: 10.1038/nature08756. Epub 2010 Feb 17. Nature. 2010. PMID: 20164839

10

Deletion analysis of the 3' long terminal repeat sequence of plant retrotransposon Tto1 identifies 125 base pairs redundancy as sufficient for first strand transfer.

Tramontano A, Donath A, Bernhart SH, Reiche K, Böhmdorfer G, Stadler PF, Bachmair A. Tramontano A, et al. Among authors: reiche k. Virology. 2011 Mar 30;412(1):75-82. doi: 10.1016/j.virol.2010.12.059. Epub 2011 Jan 22. Virology. 2011. PMID: 21262516 Free PMC article.

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