Ranish JA - Search Results

1

Absolute Quantification of Transcription Factors Reveals Principles of Gene Regulation in Erythropoiesis.

Gillespie MA, Palii CG, Sanchez-Taltavull D, Shannon P, Longabaugh WJR, Downes DJ, Sivaraman K, Espinoza HM, Hughes JR, Price ND, Perkins TJ, Ranish JA, Brand M. Gillespie MA, et al. Among authors: ranish ja. Mol Cell. 2020 Jun 4;78(5):960-974.e11. doi: 10.1016/j.molcel.2020.03.031. Epub 2020 Apr 23. Mol Cell. 2020. PMID: 32330456 Free PMC article.

2

Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics.

Brand M, Ranish JA, Kummer NT, Hamilton J, Igarashi K, Francastel C, Chi TH, Crabtree GR, Aebersold R, Groudine M. Brand M, et al. Among authors: ranish ja. Nat Struct Mol Biol. 2004 Jan;11(1):73-80. doi: 10.1038/nsmb713. Epub 2003 Dec 29. Nat Struct Mol Biol. 2004. PMID: 14718926

3

Using stable isotope tagging and mass spectrometry to characterize protein complexes and to detect changes in their composition.

Ranish JA, Brand M, Aebersold R. Ranish JA, et al. Methods Mol Biol. 2007;359:17-35. doi: 10.1007/978-1-59745-255-7_2. Methods Mol Biol. 2007. PMID: 17484108

4

Activator-mediated recruitment of the MLL2 methyltransferase complex to the beta-globin locus.

Demers C, Chaturvedi CP, Ranish JA, Juban G, Lai P, Morle F, Aebersold R, Dilworth FJ, Groudine M, Brand M. Demers C, et al. Among authors: ranish ja. Mol Cell. 2007 Aug 17;27(4):573-84. doi: 10.1016/j.molcel.2007.06.022. Mol Cell. 2007. PMID: 17707229 Free PMC article.

5

Dual role for the methyltransferase G9a in the maintenance of beta-globin gene transcription in adult erythroid cells.

Chaturvedi CP, Hosey AM, Palii C, Perez-Iratxeta C, Nakatani Y, Ranish JA, Dilworth FJ, Brand M. Chaturvedi CP, et al. Among authors: ranish ja. Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18303-8. doi: 10.1073/pnas.0906769106. Epub 2009 Oct 12. Proc Natl Acad Sci U S A. 2009. PMID: 19822740 Free PMC article.

6

p38-{gamma}-dependent gene silencing restricts entry into the myogenic differentiation program.

Gillespie MA, Le Grand F, Scimè A, Kuang S, von Maltzahn J, Seale V, Cuenda A, Ranish JA, Rudnicki MA. Gillespie MA, et al. Among authors: ranish ja. J Cell Biol. 2009 Dec 28;187(7):991-1005. doi: 10.1083/jcb.200907037. Epub 2009 Dec 21. J Cell Biol. 2009. PMID: 20026657 Free PMC article.

7

Systematic measurement of transcription factor-DNA interactions by targeted mass spectrometry identifies candidate gene regulatory proteins.

Mirzaei H, Knijnenburg TA, Kim B, Robinson M, Picotti P, Carter GW, Li S, Dilworth DJ, Eng JK, Aitchison JD, Shmulevich I, Galitski T, Aebersold R, Ranish J. Mirzaei H, et al. Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3645-50. doi: 10.1073/pnas.1216918110. Epub 2013 Feb 6. Proc Natl Acad Sci U S A. 2013. PMID: 23388641 Free PMC article.

8

An LXR-NCOA5 gene regulatory complex directs inflammatory crosstalk-dependent repression of macrophage cholesterol efflux.

Gillespie MA, Gold ES, Ramsey SA, Podolsky I, Aderem A, Ranish JA. Gillespie MA, et al. Among authors: ranish ja. EMBO J. 2015 May 5;34(9):1244-58. doi: 10.15252/embj.201489819. Epub 2015 Mar 9. EMBO J. 2015. PMID: 25755249 Free PMC article.

9

Mechanism for microbial population collapse in a fluctuating resource environment.

Turkarslan S, Raman AV, Thompson AW, Arens CE, Gillespie MA, von Netzer F, Hillesland KL, Stolyar S, López García de Lomana A, Reiss DJ, Gorman-Lewis D, Zane GM, Ranish JA, Wall JD, Stahl DA, Baliga NS. Turkarslan S, et al. Among authors: ranish ja. Mol Syst Biol. 2017 Mar 20;13(3):919. doi: 10.15252/msb.20167058. Mol Syst Biol. 2017. PMID: 28320772 Free PMC article.

10

SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters.

Nakayama RT, Pulice JL, Valencia AM, McBride MJ, McKenzie ZM, Gillespie MA, Ku WL, Teng M, Cui K, Williams RT, Cassel SH, Qing H, Widmer CJ, Demetri GD, Irizarry RA, Zhao K, Ranish JA, Kadoch C. Nakayama RT, et al. Among authors: ranish ja. Nat Genet. 2017 Nov;49(11):1613-1623. doi: 10.1038/ng.3958. Epub 2017 Sep 25. Nat Genet. 2017. PMID: 28945250 Free PMC article.

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