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Page 1
Comparative genomics of Bordetella pertussis and prediction of new vaccines and drug targets.
Felice AG, Santos LNQ, Kolossowski I, Zen FL, Alves LG, Rodrigues TCV, Prado LCS, Jaiswal AK, Tiwari S, Miranda FM, Ramos RTJ, Azevedo V, Oliveira CJF, Benevides LJ, Soares SC. Felice AG, et al. Among authors: ramos rtj. J Biomol Struct Dyn. 2022;40(20):10136-10152. doi: 10.1080/07391102.2021.1940279. Epub 2021 Jun 22. J Biomol Struct Dyn. 2022. PMID: 34155952
Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains.
Ruiz JC, D'Afonseca V, Silva A, Ali A, Pinto AC, Santos AR, Rocha AA, Lopes DO, Dorella FA, Pacheco LG, Costa MP, Turk MZ, Seyffert N, Moraes PM, Soares SC, Almeida SS, Castro TL, Abreu VA, Trost E, Baumbach J, Tauch A, Schneider MP, McCulloch J, Cerdeira LT, Ramos RT, Zerlotini A, Dominitini A, Resende DM, Coser EM, Oliveira LM, Pedrosa AL, Vieira CU, Guimarães CT, Bartholomeu DC, Oliveira DM, Santos FR, Rabelo ÉM, Lobo FP, Franco GR, Costa AF, Castro IM, Dias SR, Ferro JA, Ortega JM, Paiva LV, Goulart LR, Almeida JF, Ferro MI, Carneiro NP, Falcão PR, Grynberg P, Teixeira SM, Brommonschenkel S, Oliveira SC, Meyer R, Moore RJ, Miyoshi A, Oliveira GC, Azevedo V. Ruiz JC, et al. PLoS One. 2011 Apr 18;6(4):e18551. doi: 10.1371/journal.pone.0018551. PLoS One. 2011. PMID: 21533164 Free PMC article.
PIPS: pathogenicity island prediction software.
Soares SC, Abreu VA, Ramos RT, Cerdeira L, Silva A, Baumbach J, Trost E, Tauch A, Hirata R Jr, Mattos-Guaraldi AL, Miyoshi A, Azevedo V. Soares SC, et al. PLoS One. 2012;7(2):e30848. doi: 10.1371/journal.pone.0030848. Epub 2012 Feb 15. PLoS One. 2012. PMID: 22355329 Free PMC article.
The Corynebacterium pseudotuberculosis in silico predicted pan-exoproteome.
Santos AR, Carneiro A, Gala-García A, Pinto A, Barh D, Barbosa E, Aburjaile F, Dorella F, Rocha F, Guimarães L, Zurita-Turk M, Ramos R, Almeida S, Soares S, Pereira U, Abreu VC, Silva A, Miyoshi A, Azevedo V. Santos AR, et al. BMC Genomics. 2012;13 Suppl 5(Suppl 5):S6. doi: 10.1186/1471-2164-13-S5-S6. Epub 2012 Oct 19. BMC Genomics. 2012. PMID: 23095951 Free PMC article.
Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production.
Soares SC, Trost E, Ramos RT, Carneiro AR, Santos AR, Pinto AC, Barbosa E, Aburjaile F, Ali A, Diniz CA, Hassan SS, Fiaux K, Guimarães LC, Bakhtiar SM, Pereira U, Almeida SS, Abreu VA, Rocha FS, Dorella FA, Miyoshi A, Silva A, Azevedo V, Tauch A. Soares SC, et al. J Biotechnol. 2013 Aug 20;167(2):135-41. doi: 10.1016/j.jbiotec.2012.11.003. Epub 2012 Nov 29. J Biotechnol. 2013. PMID: 23201561
Ion Torrent-based transcriptional assessment of a Corynebacterium pseudotuberculosis equi strain reveals denaturing high-performance liquid chromatography a promising rRNA depletion method.
Castro TL, Seyffert N, Ramos RT, Barbosa S, Carvalho RD, Pinto AC, Carneiro AR, Silva WM, Pacheco LG, Downson C, Schneider MP, Miyoshi A, Azevedo V, Silva A. Castro TL, et al. Microb Biotechnol. 2013 Mar;6(2):168-77. doi: 10.1111/1751-7915.12020. Epub 2013 Jan 15. Microb Biotechnol. 2013. PMID: 23316806 Free PMC article.
The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains.
Soares SC, Silva A, Trost E, Blom J, Ramos R, Carneiro A, Ali A, Santos AR, Pinto AC, Diniz C, Barbosa EG, Dorella FA, Aburjaile F, Rocha FS, Nascimento KK, Guimarães LC, Almeida S, Hassan SS, Bakhtiar SM, Pereira UP, Abreu VA, Schneider MP, Miyoshi A, Tauch A, Azevedo V. Soares SC, et al. PLoS One. 2013;8(1):e53818. doi: 10.1371/journal.pone.0053818. Epub 2013 Jan 14. PLoS One. 2013. PMID: 23342011 Free PMC article.
130 results