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Whole-genome sequencing reveals misidentification of a multidrug-resistant urine clinical isolate as Corynebacterium urealyticum.
Rocha DJP, Azevedo V, Brenig B, Silva A, Blom J, Ramos RT, Aguiar ERG, Chapartegui-González I, Fernández-Martínez M, Martínez-Martínez L, Pacheco LGC, Navas J. Rocha DJP, et al. Among authors: ramos rt. J Glob Antimicrob Resist. 2020 Dec;23:16-19. doi: 10.1016/j.jgar.2020.07.020. Epub 2020 Aug 8. J Glob Antimicrob Resist. 2020. PMID: 32777440 Free article.
Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains.
Ruiz JC, D'Afonseca V, Silva A, Ali A, Pinto AC, Santos AR, Rocha AA, Lopes DO, Dorella FA, Pacheco LG, Costa MP, Turk MZ, Seyffert N, Moraes PM, Soares SC, Almeida SS, Castro TL, Abreu VA, Trost E, Baumbach J, Tauch A, Schneider MP, McCulloch J, Cerdeira LT, Ramos RT, Zerlotini A, Dominitini A, Resende DM, Coser EM, Oliveira LM, Pedrosa AL, Vieira CU, Guimarães CT, Bartholomeu DC, Oliveira DM, Santos FR, Rabelo ÉM, Lobo FP, Franco GR, Costa AF, Castro IM, Dias SR, Ferro JA, Ortega JM, Paiva LV, Goulart LR, Almeida JF, Ferro MI, Carneiro NP, Falcão PR, Grynberg P, Teixeira SM, Brommonschenkel S, Oliveira SC, Meyer R, Moore RJ, Miyoshi A, Oliveira GC, Azevedo V. Ruiz JC, et al. Among authors: ramos rt. PLoS One. 2011 Apr 18;6(4):e18551. doi: 10.1371/journal.pone.0018551. PLoS One. 2011. PMID: 21533164 Free PMC article.
PIPS: pathogenicity island prediction software.
Soares SC, Abreu VA, Ramos RT, Cerdeira L, Silva A, Baumbach J, Trost E, Tauch A, Hirata R Jr, Mattos-Guaraldi AL, Miyoshi A, Azevedo V. Soares SC, et al. Among authors: ramos rt. PLoS One. 2012;7(2):e30848. doi: 10.1371/journal.pone.0030848. Epub 2012 Feb 15. PLoS One. 2012. PMID: 22355329 Free PMC article.
Complete genome sequence of Corynebacterium pseudotuberculosis strain 1/06-A, isolated from a horse in North America.
Pethick FE, Lainson AF, Yaga R, Flockhart A, Smith DG, Donachie W, Cerdeira LT, Silva A, Bol E, Lopes TS, Barbosa MS, Pinto AC, Dos Santos AR, Soares SC, Almeida SS, Guimaraes LC, Aburjaile FF, Abreu VA, Ribeiro D, Fiaux KK, Diniz CA, Barbosa EG, Pereira UP, Hassan SS, Ali A, Bakhtiar SM, Dorella FA, Carneiro AR, Ramos RT, Rocha FS, Schneider MP, Miyoshi A, Azevedo V, Fontaine MC. Pethick FE, et al. Among authors: ramos rt. J Bacteriol. 2012 Aug;194(16):4476. doi: 10.1128/JB.00922-12. J Bacteriol. 2012. PMID: 22843601 Free PMC article.
Complete genome sequences of Corynebacterium pseudotuberculosis strains 3/99-5 and 42/02-A, isolated from sheep in Scotland and Australia, respectively.
Pethick FE, Lainson AF, Yaga R, Flockhart A, Smith DG, Donachie W, Cerdeira LT, Silva A, Bol E, Lopes TS, Barbosa MS, Pinto AC, dos Santos AR, Soares SC, Almeida SS, Guimaraes LC, Aburjaile FF, Abreu VA, Ribeiro D, Fiaux KK, Diniz CA, Barbosa EG, Pereira UP, Hassan SS, Ali A, Bakhtiar SM, Dorella FA, Carneiro AR, Ramos RT, Rocha FS, Schneider MP, Miyoshi A, Azevedo V, Fontaine MC. Pethick FE, et al. Among authors: ramos rt. J Bacteriol. 2012 Sep;194(17):4736-7. doi: 10.1128/JB.00918-12. J Bacteriol. 2012. PMID: 22887652 Free PMC article.
Campylobacter fetus subspecies: comparative genomics and prediction of potential virulence targets.
Ali A, Soares SC, Santos AR, Guimarães LC, Barbosa E, Almeida SS, Abreu VA, Carneiro AR, Ramos RT, Bakhtiar SM, Hassan SS, Ussery DW, On S, Silva A, Schneider MP, Lage AP, Miyoshi A, Azevedo V. Ali A, et al. Among authors: ramos rt. Gene. 2012 Oct 25;508(2):145-56. doi: 10.1016/j.gene.2012.07.070. Epub 2012 Aug 6. Gene. 2012. PMID: 22890137 Free article.
The Corynebacterium pseudotuberculosis in silico predicted pan-exoproteome.
Santos AR, Carneiro A, Gala-García A, Pinto A, Barh D, Barbosa E, Aburjaile F, Dorella F, Rocha F, Guimarães L, Zurita-Turk M, Ramos R, Almeida S, Soares S, Pereira U, Abreu VC, Silva A, Miyoshi A, Azevedo V. Santos AR, et al. BMC Genomics. 2012;13 Suppl 5(Suppl 5):S6. doi: 10.1186/1471-2164-13-S5-S6. Epub 2012 Oct 19. BMC Genomics. 2012. PMID: 23095951 Free PMC article.
Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production.
Soares SC, Trost E, Ramos RT, Carneiro AR, Santos AR, Pinto AC, Barbosa E, Aburjaile F, Ali A, Diniz CA, Hassan SS, Fiaux K, Guimarães LC, Bakhtiar SM, Pereira U, Almeida SS, Abreu VA, Rocha FS, Dorella FA, Miyoshi A, Silva A, Azevedo V, Tauch A. Soares SC, et al. Among authors: ramos rt. J Biotechnol. 2013 Aug 20;167(2):135-41. doi: 10.1016/j.jbiotec.2012.11.003. Epub 2012 Nov 29. J Biotechnol. 2013. PMID: 23201561
197 results