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SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021-Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing.
Goncalves Cabecinhas AR, Roloff T, Stange M, Bertelli C, Huber M, Ramette A, Chen C, Nadeau S, Gerth Y, Yerly S, Opota O, Pillonel T, Schuster T, Metzger CMJA, Sieber J, Bel M, Wohlwend N, Baumann C, Koch MC, Bittel P, Leuzinger K, Brunner M, Suter-Riniker F, Berlinger L, Søgaard KK, Beckmann C, Noppen C, Redondo M, Steffen I, Seth-Smith HMB, Mari A, Lienhard R, Risch M, Nolte O, Eckerle I, Martinetti Lucchini G, Hodcroft EB, Neher RA, Stadler T, Hirsch HH, Leib SL, Risch L, Kaiser L, Trkola A, Greub G, Egli A. Goncalves Cabecinhas AR, et al. Among authors: ramette a. Microorganisms. 2021 Mar 25;9(4):677. doi: 10.3390/microorganisms9040677. Microorganisms. 2021. PMID: 33806013 Free PMC article.
Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform.
Egli A, Blanc DS, Greub G, Keller PM, Lazarevic V, Lebrand A, Leib S, Neher RA, Perreten V, Ramette A, Schrenzel J, Stephan R, Wagner K, Wuethrich D, Xenarios I. Egli A, et al. Among authors: ramette a. Swiss Med Wkly. 2018 Dec 15;148:w14693. doi: 10.4414/smw.2018.14693. eCollection 2018 Dec 3. Swiss Med Wkly. 2018. PMID: 30552858 Free article.
Viral Metagenomics in the Clinical Realm: Lessons Learned from a Swiss-Wide Ring Trial.
Junier T, Huber M, Schmutz S, Kufner V, Zagordi O, Neuenschwander S, Ramette A, Kubacki J, Bachofen C, Qi W, Laubscher F, Cordey S, Kaiser L, Beuret C, Barbié V, Fellay J, Lebrand A. Junier T, et al. Among authors: ramette a. Genes (Basel). 2019 Aug 28;10(9):655. doi: 10.3390/genes10090655. Genes (Basel). 2019. PMID: 31466373 Free PMC article.
A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing.
Neuenschwander SM, Terrazos Miani MA, Amlang H, Perroulaz C, Bittel P, Casanova C, Droz S, Flandrois JP, Leib SL, Suter-Riniker F, Ramette A. Neuenschwander SM, et al. Among authors: ramette a. J Clin Microbiol. 2020 May 26;58(6):e00060-20. doi: 10.1128/JCM.00060-20. Print 2020 May 26. J Clin Microbiol. 2020. PMID: 32229603 Free PMC article.
Phylogenetic Cluster Analysis Identifies Virological and Behavioral Drivers of Human Immunodeficiency Virus Transmission in Men Who Have Sex With Men.
Bachmann N, Kusejko K, Nguyen H, Chaudron SE, Kadelka C, Turk T, Böni J, Perreau M, Klimkait T, Yerly S, Battegay M, Rauch A, Ramette A, Vernazza P, Bernasconi E, Cavassini M, Günthard HF, Kouyos RD; Swiss HIV Cohort Study. Bachmann N, et al. Among authors: ramette a. Clin Infect Dis. 2021 Jun 15;72(12):2175-2183. doi: 10.1093/cid/ciaa411. Clin Infect Dis. 2021. PMID: 32300807 Free article.
Using longitudinally sampled viral nucleotide sequences to characterize the drivers of HIV-1 transmission.
Reichmuth ML, Chaudron SE, Bachmann N, Nguyen H, Böni J, Metzner KJ, Perreau M, Klimkait T, Yerly S, Hirsch HH, Hauser C, Ramette A, Vernazza P, Cavassini M, Bernasconi E, Günthard HF, Kusejko K, Kouyos RD; Swiss HIV Cohort Study. Reichmuth ML, et al. Among authors: ramette a. HIV Med. 2021 May;22(5):346-359. doi: 10.1111/hiv.13030. Epub 2020 Dec 25. HIV Med. 2021. PMID: 33368946 Free article.
118 results