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Sustainable data analysis with Snakemake.
Mölder F, Jablonski KP, Letcher B, Hall MB, Tomkins-Tinch CH, Sochat V, Forster J, Lee S, Twardziok SO, Kanitz A, Wilm A, Holtgrewe M, Rahmann S, Nahnsen S, Köster J. Mölder F, et al. Among authors: rahmann s. F1000Res. 2021 Jan 18;10:33. doi: 10.12688/f1000research.29032.2. eCollection 2021. F1000Res. 2021. PMID: 34035898 Free PMC article.
Snakemake--a scalable bioinformatics workflow engine.
Köster J, Rahmann S. Köster J, et al. Among authors: rahmann s. Bioinformatics. 2012 Oct 1;28(19):2520-2. doi: 10.1093/bioinformatics/bts480. Epub 2012 Aug 20. Bioinformatics. 2012. PMID: 22908215
SimLoRD: Simulation of Long Read Data.
Stöcker BK, Köster J, Rahmann S. Stöcker BK, et al. Among authors: rahmann s. Bioinformatics. 2016 Sep 1;32(17):2704-6. doi: 10.1093/bioinformatics/btw286. Epub 2016 May 10. Bioinformatics. 2016. PMID: 27166244
Snakemake-a scalable bioinformatics workflow engine.
Köster J, Rahmann S. Köster J, et al. Among authors: rahmann s. Bioinformatics. 2018 Oct 15;34(20):3600. doi: 10.1093/bioinformatics/bty350. Bioinformatics. 2018. PMID: 29788404 No abstract available.
The Role of Pre-existing Cross-Reactive Central Memory CD4 T-Cells in Vaccination With Previously Unseen Influenza Strains.
Nienen M, Stervbo U, Mölder F, Kaliszczyk S, Kuchenbecker L, Gayova L, Schweiger B, Jürchott K, Hecht J, Neumann AU, Rahmann S, Westhoff T, Reinke P, Thiel A, Babel N. Nienen M, et al. Among authors: rahmann s. Front Immunol. 2019 Apr 4;10:593. doi: 10.3389/fimmu.2019.00593. eCollection 2019. Front Immunol. 2019. PMID: 31019503 Free PMC article.
102 results