Radivojac P - Search Results

1

REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants.

Ioannidis NM, Rothstein JH, Pejaver V, Middha S, McDonnell SK, Baheti S, Musolf A, Li Q, Holzinger E, Karyadi D, Cannon-Albright LA, Teerlink CC, Stanford JL, Isaacs WB, Xu J, Cooney KA, Lange EM, Schleutker J, Carpten JD, Powell IJ, Cussenot O, Cancel-Tassin G, Giles GG, MacInnis RJ, Maier C, Hsieh CL, Wiklund F, Catalona WJ, Foulkes WD, Mandal D, Eeles RA, Kote-Jarai Z, Bustamante CD, Schaid DJ, Hastie T, Ostrander EA, Bailey-Wilson JE, Radivojac P, Thibodeau SN, Whittemore AS, Sieh W. Ioannidis NM, et al. Among authors: radivojac p. Am J Hum Genet. 2016 Oct 6;99(4):877-885. doi: 10.1016/j.ajhg.2016.08.016. Epub 2016 Sep 22. Am J Hum Genet. 2016. PMID: 27666373 Free PMC article.

2

The field of protein function prediction as viewed by different domain scientists.

Ramola R, Friedberg I, Radivojac P. Ramola R, et al. Among authors: radivojac p. Bioinform Adv. 2022 Aug 17;2(1):vbac057. doi: 10.1093/bioadv/vbac057. eCollection 2022. Bioinform Adv. 2022. PMID: 36699361 Free PMC article.

3

Calibration of multiple in silico tools for predicting pathogenicity of mismatch repair gene missense substitutions.

Thompson BA, Greenblatt MS, Vallee MP, Herkert JC, Tessereau C, Young EL, Adzhubey IA, Li B, Bell R, Feng B, Mooney SD, Radivojac P, Sunyaev SR, Frebourg T, Hofstra RM, Sijmons RH, Boucher K, Thomas A, Goldgar DE, Spurdle AB, Tavtigian SV. Thompson BA, et al. Among authors: radivojac p. Hum Mutat. 2013 Jan;34(1):255-65. doi: 10.1002/humu.22214. Epub 2012 Oct 22. Hum Mutat. 2013. PMID: 22949387 Free PMC article.

4

The structural and functional signatures of proteins that undergo multiple events of post-translational modification.

Pejaver V, Hsu WL, Xin F, Dunker AK, Uversky VN, Radivojac P. Pejaver V, et al. Among authors: radivojac p. Protein Sci. 2014 Aug;23(8):1077-93. doi: 10.1002/pro.2494. Epub 2014 Jun 11. Protein Sci. 2014. PMID: 24888500 Free PMC article.

5

Intrinsic Size Parameters for Palmitoylated and Carboxyamidomethylated Peptides.

Li Z, Dilger JM, Pejaver V, Smiley D, Arnold RJ, Mooney SD, Mukhopadhyay S, Radivojac P, Clemmer DE. Li Z, et al. Among authors: radivojac p. Int J Mass Spectrom. 2014 Jul 15;368:6-14. doi: 10.1016/j.ijms.2014.04.009. Int J Mass Spectrom. 2014. PMID: 26023288 Free PMC article.

6

Position of Proline Mediates the Reactivity of S-Palmitoylation.

Khanal N, Pejaver V, Li Z, Radivojac P, Clemmer DE, Mukhopadhyay S. Khanal N, et al. Among authors: radivojac p. ACS Chem Biol. 2015 Nov 20;10(11):2529-36. doi: 10.1021/acschembio.5b00429. Epub 2015 Aug 19. ACS Chem Biol. 2015. PMID: 26255674

7

The Loss and Gain of Functional Amino Acid Residues Is a Common Mechanism Causing Human Inherited Disease.

Lugo-Martinez J, Pejaver V, Pagel KA, Jain S, Mort M, Cooper DN, Mooney SD, Radivojac P. Lugo-Martinez J, et al. Among authors: radivojac p. PLoS Comput Biol. 2016 Aug 26;12(8):e1005091. doi: 10.1371/journal.pcbi.1005091. eCollection 2016 Aug. PLoS Comput Biol. 2016. PMID: 27564311 Free PMC article.

8

Missense variant pathogenicity predictors generalize well across a range of function-specific prediction challenges.

Pejaver V, Mooney SD, Radivojac P. Pejaver V, et al. Among authors: radivojac p. Hum Mutat. 2017 Sep;38(9):1092-1108. doi: 10.1002/humu.23258. Epub 2017 Jun 12. Hum Mutat. 2017. PMID: 28508593 Free PMC article.

9

When loss-of-function is loss of function: assessing mutational signatures and impact of loss-of-function genetic variants.

Pagel KA, Pejaver V, Lin GN, Nam HJ, Mort M, Cooper DN, Sebat J, Iakoucheva LM, Mooney SD, Radivojac P. Pagel KA, et al. Among authors: radivojac p. Bioinformatics. 2017 Jul 15;33(14):i389-i398. doi: 10.1093/bioinformatics/btx272. Bioinformatics. 2017. PMID: 28882004 Free PMC article.

10

The sequencing and interpretation of the genome obtained from a Serbian individual.

Mohammed Ismail W, Pagel KA, Pejaver V, Zhang SV, Casasa S, Mort M, Cooper DN, Hahn MW, Radivojac P. Mohammed Ismail W, et al. Among authors: radivojac p. PLoS One. 2018 Dec 19;13(12):e0208901. doi: 10.1371/journal.pone.0208901. eCollection 2018. PLoS One. 2018. PMID: 30566479 Free PMC article.

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