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2020 1
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Phylogeographic reconstruction of the emergence and spread of Powassan virus in the northeastern United States.
Vogels CBF, Brackney DE, Dupuis AP 2nd, Robich RM, Fauver JR, Brito AF, Williams SC, Anderson JF, Lubelczyk CB, Lange RE, Prusinski MA, Kramer LD, Gangloff-Kaufmann JL, Goodman LB, Baele G, Smith RP, Armstrong PM, Ciota AT, Dellicour S, Grubaugh ND. Vogels CBF, et al. Proc Natl Acad Sci U S A. 2023 Apr 18;120(16):e2218012120. doi: 10.1073/pnas.2218012120. Epub 2023 Apr 11. Proc Natl Acad Sci U S A. 2023. PMID: 37040418 Free PMC article.
Scalable Bayesian phylogenetics.
Fisher AA, Hassler GW, Ji X, Baele G, Suchard MA, Lemey P. Fisher AA, et al. Philos Trans R Soc Lond B Biol Sci. 2022 Oct 10;377(1861):20210242. doi: 10.1098/rstb.2021.0242. Epub 2022 Aug 22. Philos Trans R Soc Lond B Biol Sci. 2022. PMID: 35989603 Free PMC article. Review.
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework.
Dellicour S, Lequime S, Vrancken B, Gill MS, Bastide P, Gangavarapu K, Matteson NL, Tan Y, du Plessis L, Fisher AA, Nelson MI, Gilbert M, Suchard MA, Andersen KG, Grubaugh ND, Pybus OG, Lemey P. Dellicour S, et al. Nat Commun. 2020 Nov 6;11(1):5620. doi: 10.1038/s41467-020-19122-z. Nat Commun. 2020. PMID: 33159066 Free PMC article.