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Year Number of Results
2017 6
2018 4
2019 4
2020 2
2021 4
2022 2
2023 3
2024 1

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24 results

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Page 1
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G, Behera AK, Gonzalez JM, Hunt T, Lagarde J, Liang CE, Li H, Jerryd Meade M, Moraga Amador DA, Prjibelski AD, Birol I, Bostan H, Brooks AM, Hasan Çelik M, Chen Y, Du MRM, Felton C, Göke J, Hafezqorani S, Herwig R, Kawaji H, Lee J, Liang Li J, Lienhard M, Mikheenko A, Mulligan D, Ming Nip K, Pertea M, Ritchie ME, Sim AD, Tang AD, Kei Wan Y, Wang C, Wong BY, Yang C, Barnes I, Berry A, Capella S, Dhillon N, Fernandez-Gonzalez JM, Ferrández-Peral L, Garcia-Reyero N, Goetz S, Hernández-Ferrer C, Kondratova L, Liu T, Martinez-Martin A, Menor C, Mestre-Tomás J, Mudge JM, Panayotova NG, Paniagua A, Repchevsky D, Rouchka E, Saint-John B, Sapena E, Sheynkman L, Laird Smith M, Suner MM, Takahashi H, Youngworth IA, Carninci P, Denslow ND, Guigó R, Hunter ME, Tilgner HU, Wold BJ, Vollmers C, Frankish A, Fai Au K, Sheynkman GM, Mortazavi A, Conesa A, Brooks AN. Pardo-Palacios FJ, et al. bioRxiv [Preprint]. 2023 Jul 27:2023.07.25.550582. doi: 10.1101/2023.07.25.550582. bioRxiv. 2023. PMID: 37546854 Free PMC article. Preprint.
Single-cell m6A mapping in vivo using picoMeRIP-seq.
Li Y, Wang Y, Vera-Rodriguez M, Lindeman LC, Skuggen LE, Rasmussen EMK, Jermstad I, Khan S, Fosslie M, Skuland T, Indahl M, Khodeer S, Klemsdal EK, Jin KX, Dalen KT, Fedorcsak P, Greggains GD, Lerdrup M, Klungland A, Au KF, Dahl JA. Li Y, et al. Nat Biotechnol. 2024 Apr;42(4):591-596. doi: 10.1038/s41587-023-01831-7. Epub 2023 Jun 22. Nat Biotechnol. 2024. PMID: 37349523 Free PMC article.
The RNA m6A landscape of mouse oocytes and preimplantation embryos.
Wang Y, Li Y, Skuland T, Zhou C, Li A, Hashim A, Jermstad I, Khan S, Dalen KT, Greggains GD, Klungland A, Dahl JA, Au KF. Wang Y, et al. Nat Struct Mol Biol. 2023 May;30(5):703-709. doi: 10.1038/s41594-023-00969-x. Epub 2023 Apr 20. Nat Struct Mol Biol. 2023. PMID: 37081317 Free PMC article.
Real-time mapping of nanopore raw signals.
Zhang H, Li H, Jain C, Cheng H, Au KF, Li H, Aluru S. Zhang H, et al. Bioinformatics. 2021 Jul 12;37(Suppl_1):i477-i483. doi: 10.1093/bioinformatics/btab264. Bioinformatics. 2021. PMID: 34252938 Free PMC article.
24 results