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Page 1
Reevaluation of the evolutionary events within recA/RAD51 phylogeny.
Chintapalli SV, Bhardwaj G, Babu J, Hadjiyianni L, Hong Y, Todd GK, Boosalis CA, Zhang Z, Zhou X, Ma H, Anishkin A, van Rossum DB, Patterson RL. Chintapalli SV, et al. BMC Genomics. 2013 Apr 10;14:240. doi: 10.1186/1471-2164-14-240. BMC Genomics. 2013. PMID: 23574621 Free PMC article.
PHYRN: a robust method for phylogenetic analysis of highly divergent sequences.
Bhardwaj G, Ko KD, Hong Y, Zhang Z, Ho NL, Chintapalli SV, Kline LA, Gotlin M, Hartranft DN, Patterson ME, Dave F, Smith EJ, Holmes EC, Patterson RL, van Rossum DB. Bhardwaj G, et al. PLoS One. 2012;7(4):e34261. doi: 10.1371/journal.pone.0034261. Epub 2012 Apr 13. PLoS One. 2012. PMID: 22514627 Free PMC article.
Predicting protein folds with fold-specific PSSM libraries.
Hong Y, Chintapalli SV, Ko KD, Bhardwaj G, Zhang Z, van Rossum D, Patterson RL. Hong Y, et al. PLoS One. 2011;6(6):e20557. doi: 10.1371/journal.pone.0020557. Epub 2011 Jun 16. PLoS One. 2011. PMID: 21698189 Free PMC article.