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Structural and mechanistic basis of σ-dependent transcriptional pausing.
Proc Natl Acad Sci U S A. 2022 Jun 7;119(23):e2201301119. doi: 10.1073/pnas.2201301119. Epub 2022 Jun 2.
Proc Natl Acad Sci U S A. 2022.
PMID: 35653571
Free PMC article.
The mechanism of variability in transcription start site selection.
Yu L, Winkelman JT, Pukhrambam C, Strick TR, Nickels BE, Ebright RH.
Yu L, et al. Among authors: pukhrambam c.
Elife. 2017 Nov 23;6:e32038. doi: 10.7554/eLife.32038.
Elife. 2017.
PMID: 29168694
Free PMC article.
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XACT-Seq Comprehensively Defines the Promoter-Position and Promoter-Sequence Determinants for Initial-Transcription Pausing.
Winkelman JT, Pukhrambam C, Vvedenskaya IO, Zhang Y, Taylor DM, Shah P, Ebright RH, Nickels BE.
Winkelman JT, et al. Among authors: pukhrambam c.
Mol Cell. 2020 Sep 3;79(5):797-811.e8. doi: 10.1016/j.molcel.2020.07.006. Epub 2020 Aug 3.
Mol Cell. 2020.
PMID: 32750314
Free PMC article.
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XACT-seq: A photocrosslinking-based technique for detection of the RNA polymerase active-center position relative to DNA in Escherichia coli.
Pukhrambam C, Vvedenskaya IO, Nickels BE.
Pukhrambam C, et al.
STAR Protoc. 2021 Oct 8;2(4):100858. doi: 10.1016/j.xpro.2021.100858. eCollection 2021 Dec 17.
STAR Protoc. 2021.
PMID: 34693360
Free PMC article.
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Structural and mechanistic basis of reiterative transcription initiation.
Liu Y, Yu L, Pukhrambam C, Winkelman JT, Firlar E, Kaelber JT, Zhang Y, Nickels BE, Ebright RH.
Liu Y, et al. Among authors: pukhrambam c.
Proc Natl Acad Sci U S A. 2022 Feb 1;119(5):e2115746119. doi: 10.1073/pnas.2115746119.
Proc Natl Acad Sci U S A. 2022.
PMID: 35082149
Free PMC article.
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Initial transcribed region sequences influence the composition and functional properties of the bacterial elongation complex.
Deighan P, Pukhrambam C, Nickels BE, Hochschild A.
Deighan P, et al. Among authors: pukhrambam c.
Genes Dev. 2011 Jan 1;25(1):77-88. doi: 10.1101/gad.1991811.
Genes Dev. 2011.
PMID: 21205867
Free PMC article.
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Structural basis for the bacterial transcription-repair coupling factor/RNA polymerase interaction.
Westblade LF, Campbell EA, Pukhrambam C, Padovan JC, Nickels BE, Lamour V, Darst SA.
Westblade LF, et al. Among authors: pukhrambam c.
Nucleic Acids Res. 2010 Dec;38(22):8357-69. doi: 10.1093/nar/gkq692. Epub 2010 Aug 11.
Nucleic Acids Res. 2010.
PMID: 20702425
Free PMC article.
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