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Benchmarking data-driven filtering for denoising of TCRpMHC single-cell data.
Sci Rep. 2023 Sep 26;13(1):16147. doi: 10.1038/s41598-023-43048-3.
Sci Rep. 2023.
PMID: 37752190
Free PMC article.
Improved T cell receptor antigen pairing through data-driven filtering of sequencing information from single cells.
Povlsen HR, Bentzen AK, Kadivar M, Jessen LE, Hadrup SR, Nielsen M.
Povlsen HR, et al.
Elife. 2023 May 3;12:e81810. doi: 10.7554/eLife.81810.
Elife. 2023.
PMID: 37133356
Free PMC article.
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NetTCR-2.0 enables accurate prediction of TCR-peptide binding by using paired TCRα and β sequence data.
Montemurro A, Schuster V, Povlsen HR, Bentzen AK, Jurtz V, Chronister WD, Crinklaw A, Hadrup SR, Winther O, Peters B, Jessen LE, Nielsen M.
Montemurro A, et al. Among authors: povlsen hr.
Commun Biol. 2021 Sep 10;4(1):1060. doi: 10.1038/s42003-021-02610-3.
Commun Biol. 2021.
PMID: 34508155
Free PMC article.
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SARS-CoV-2 genome-wide T cell epitope mapping reveals immunodominance and substantial CD8+ T cell activation in COVID-19 patients.
Saini SK, Hersby DS, Tamhane T, Povlsen HR, Amaya Hernandez SP, Nielsen M, Gang AO, Hadrup SR.
Saini SK, et al. Among authors: povlsen hr.
Sci Immunol. 2021 Apr 14;6(58):eabf7550. doi: 10.1126/sciimmunol.abf7550.
Sci Immunol. 2021.
PMID: 33853928
Free PMC article.
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