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Page 1
Chromosome-scale Echinococcus granulosus (genotype G1) genome reveals the Eg95 gene family and conservation of the EG95-vaccine molecule.
Korhonen PK, Kinkar L, Young ND, Cai H, Lightowlers MW, Gauci C, Jabbar A, Chang BCH, Wang T, Hofmann A, Koehler AV, Li J, Li J, Wang D, Yin J, Yang H, Jenkins DJ, Saarma U, Laurimäe T, Rostami-Nejad M, Irshadullah M, Mirhendi H, Sharbatkhori M, Ponce-Gordo F, Simsek S, Casulli A, Zait H, Atoyan H, de la Rue ML, Romig T, Wassermann M, Aghayan SA, Gevorgyan H, Yang B, Gasser RB. Korhonen PK, et al. Among authors: ponce gordo f. Commun Biol. 2022 Mar 3;5(1):199. doi: 10.1038/s42003-022-03125-1. Commun Biol. 2022. PMID: 35241789 Free PMC article.
High-resolution phylogeography of zoonotic tapeworm Echinococcus granulosus sensu stricto genotype G1 with an emphasis on its distribution in Turkey, Italy and Spain.
Kinkar L, Laurimäe T, Simsek S, Balkaya I, Casulli A, Manfredi MT, Ponce-Gordo F, Varcasia A, Lavikainen A, González LM, Rehbein S, VAN DER Giessen J, Sprong H, Saarma U. Kinkar L, et al. Parasitology. 2016 Nov;143(13):1790-1801. doi: 10.1017/S0031182016001530. Epub 2016 Aug 30. Parasitology. 2016. PMID: 27572265
New mitogenome and nuclear evidence on the phylogeny and taxonomy of the highly zoonotic tapeworm Echinococcus granulosus sensu stricto.
Kinkar L, Laurimäe T, Sharbatkhori M, Mirhendi H, Kia EB, Ponce-Gordo F, Andresiuk V, Simsek S, Lavikainen A, Irshadullah M, Umhang G, Oudni-M'rad M, Acosta-Jamett G, Rehbein S, Saarma U. Kinkar L, et al. Infect Genet Evol. 2017 Aug;52:52-58. doi: 10.1016/j.meegid.2017.04.023. Epub 2017 Apr 27. Infect Genet Evol. 2017. PMID: 28456662
Genetic diversity and phylogeography of the elusive, but epidemiologically important Echinococcus granulosus sensu stricto genotype G3.
Kinkar L, Laurimäe T, Balkaya I, Casulli A, Zait H, Irshadullah M, Sharbatkhori M, Mirhendi H, Rostami-Nejad M, Ponce-Gordo F, Rehbein S, Kia EB, Simsek S, Šnábel V, Umhang G, Varcasia A, Saarma U. Kinkar L, et al. Parasitology. 2018 Oct;145(12):1613-1622. doi: 10.1017/S0031182018000549. Epub 2018 Apr 17. Parasitology. 2018. PMID: 29661261
Molecular phylogeny based on six nuclear genes suggests that Echinococcus granulosus sensu lato genotypes G6/G7 and G8/G10 can be regarded as two distinct species.
Laurimäe T, Kinkar L, Moks E, Romig T, Omer RA, Casulli A, Umhang G, Bagrade G, Irshadullah M, Sharbatkhori M, Mirhendi H, Ponce-Gordo F, Soriano SV, Varcasia A, Rostami-Nejad M, Andresiuk V, Saarma U. Laurimäe T, et al. Parasitology. 2018 Dec;145(14):1929-1937. doi: 10.1017/S0031182018000719. Epub 2018 May 21. Parasitology. 2018. PMID: 29781421
Global phylogeography and genetic diversity of the zoonotic tapeworm Echinococcus granulosus sensu stricto genotype G1.
Kinkar L, Laurimäe T, Acosta-Jamett G, Andresiuk V, Balkaya I, Casulli A, Gasser RB, van der Giessen J, González LM, Haag KL, Zait H, Irshadullah M, Jabbar A, Jenkins DJ, Kia EB, Manfredi MT, Mirhendi H, M'rad S, Rostami-Nejad M, Oudni-M'rad M, Pierangeli NB, Ponce-Gordo F, Rehbein S, Sharbatkhori M, Simsek S, Soriano SV, Sprong H, Šnábel V, Umhang G, Varcasia A, Saarma U. Kinkar L, et al. Int J Parasitol. 2018 Aug;48(9-10):729-742. doi: 10.1016/j.ijpara.2018.03.006. Epub 2018 May 19. Int J Parasitol. 2018. PMID: 29782829 Free article.
The benefits of analysing complete mitochondrial genomes: Deep insights into the phylogeny and population structure of Echinococcus granulosus sensu lato genotypes G6 and G7.
Laurimäe T, Kinkar L, Romig T, Omer RA, Casulli A, Umhang G, Gasser RB, Jabbar A, Sharbatkhori M, Mirhendi H, Ponce-Gordo F, Lazzarini LE, Soriano SV, Varcasia A, Rostami Nejad M, Andresiuk V, Maravilla P, González LM, Dybicz M, Gawor J, Šarkūnas M, Šnábel V, Kuzmina T, Saarma U. Laurimäe T, et al. Infect Genet Evol. 2018 Oct;64:85-94. doi: 10.1016/j.meegid.2018.06.016. Epub 2018 Jun 12. Infect Genet Evol. 2018. PMID: 29906638
Distinguishing Echinococcus granulosus sensu stricto genotypes G1 and G3 with confidence: A practical guide.
Kinkar L, Laurimäe T, Acosta-Jamett G, Andresiuk V, Balkaya I, Casulli A, Gasser RB, González LM, Haag KL, Zait H, Irshadullah M, Jabbar A, Jenkins DJ, Manfredi MT, Mirhendi H, M'rad S, Rostami-Nejad M, Oudni-M'rad M, Pierangeli NB, Ponce-Gordo F, Rehbein S, Sharbatkhori M, Kia EB, Simsek S, Soriano SV, Sprong H, Šnábel V, Umhang G, Varcasia A, Saarma U. Kinkar L, et al. Infect Genet Evol. 2018 Oct;64:178-184. doi: 10.1016/j.meegid.2018.06.026. Epub 2018 Jun 21. Infect Genet Evol. 2018. PMID: 29936039
Analysis of nad2 and nad5 enables reliable identification of genotypes G6 and G7 within the species complex Echinococcus granulosus sensu lato.
Laurimäe T, Kinkar L, Romig T, Umhang G, Casulli A, Omer RA, Sharbatkhori M, Mirhendi H, Ponce-Gordo F, Lazzarini LE, Soriano SV, Varcasia A, Rostami-Nejad M, Andresiuk V, Maravilla P, González LM, Dybicz M, Gawor J, Šarkūnas M, Šnábel V, Kuzmina T, Kia EB, Saarma U. Laurimäe T, et al. Infect Genet Evol. 2019 Oct;74:103941. doi: 10.1016/j.meegid.2019.103941. Epub 2019 Jun 25. Infect Genet Evol. 2019. PMID: 31247339
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