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Generation of synthetic whole-slide image tiles of tumours from RNA-sequencing data via cascaded diffusion models.
Nat Biomed Eng. 2024 Mar 21. doi: 10.1038/s41551-024-01193-8. Online ahead of print.
Nat Biomed Eng. 2024.
PMID: 38514775
GeNNius: an ultrafast drug-target interaction inference method based on graph neural networks.
Veleiro U, de la Fuente J, Serrano G, Pizurica M, Casals M, Pineda-Lucena A, Vicent S, Ochoa I, Gevaert O, Hernaez M.
Veleiro U, et al. Among authors: pizurica m.
Bioinformatics. 2024 Jan 2;40(1):btad774. doi: 10.1093/bioinformatics/btad774.
Bioinformatics. 2024.
PMID: 38134424
Free PMC article.
Item in Clipboard
Digital profiling of cancer transcriptomes from histology images with grouped vision attention.
Zheng Y, Pizurica M, Carrillo-Perez F, Noor H, Yao W, Wohlfart C, Marchal K, Vladimirova A, Gevaert O.
Zheng Y, et al. Among authors: pizurica m.
bioRxiv [Preprint]. 2024 Jan 19:2023.09.28.560068. doi: 10.1101/2023.09.28.560068.
bioRxiv. 2024.
PMID: 37808782
Free PMC article.
Preprint.
Item in Clipboard
Multimodal data fusion for cancer biomarker discovery with deep learning.
Steyaert S, Pizurica M, Nagaraj D, Khandelwal P, Hernandez-Boussard T, Gentles AJ, Gevaert O.
Steyaert S, et al. Among authors: pizurica m.
Nat Mach Intell. 2023 Apr;5(4):351-362. doi: 10.1038/s42256-023-00633-5. Epub 2023 Apr 6.
Nat Mach Intell. 2023.
PMID: 37693852
Free PMC article.
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Synthetic whole-slide image tile generation with gene expression profile-infused deep generative models.
Carrillo-Perez F, Pizurica M, Ozawa MG, Vogel H, West RB, Kong CS, Herrera LJ, Shen J, Gevaert O.
Carrillo-Perez F, et al. Among authors: pizurica m.
Cell Rep Methods. 2023 Jul 19;3(8):100534. doi: 10.1016/j.crmeth.2023.100534. eCollection 2023 Aug 28.
Cell Rep Methods. 2023.
PMID: 37671024
Free PMC article.
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Spatial cellular architecture predicts prognosis in glioblastoma.
Zheng Y, Carrillo-Perez F, Pizurica M, Heiland DH, Gevaert O.
Zheng Y, et al. Among authors: pizurica m.
Nat Commun. 2023 Jul 11;14(1):4122. doi: 10.1038/s41467-023-39933-0.
Nat Commun. 2023.
PMID: 37433817
Free PMC article.
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Whole Slide Imaging-Based Prediction of TP53 Mutations Identifies an Aggressive Disease Phenotype in Prostate Cancer.
Pizurica M, Larmuseau M, Van der Eecken K, de Schaetzen van Brienen L, Carrillo-Perez F, Isphording S, Lumen N, Van Dorpe J, Ost P, Verbeke S, Gevaert O, Marchal K.
Pizurica M, et al.
Cancer Res. 2023 Sep 1;83(17):2970-2984. doi: 10.1158/0008-5472.CAN-22-3113.
Cancer Res. 2023.
PMID: 37352385
Free PMC article.
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RNA-to-image multi-cancer synthesis using cascaded diffusion models.
Carrillo-Perez F, Pizurica M, Zheng Y, Nandi TN, Madduri R, Shen J, Gevaert O.
Carrillo-Perez F, et al. Among authors: pizurica m.
bioRxiv [Preprint]. 2023 Jul 10:2023.01.13.523899. doi: 10.1101/2023.01.13.523899.
bioRxiv. 2023.
PMID: 36711711
Free PMC article.
Updated.
Preprint.
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