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Impacts of a changing earth on microbial dynamics and human health risks in the continuum between beach water and sand.
Weiskerger CJ, Brandão J, Ahmed W, Aslan A, Avolio L, Badgley BD, Boehm AB, Edge TA, Fleisher JM, Heaney CD, Jordao L, Kinzelman JL, Klaus JS, Kleinheinz GT, Meriläinen P, Nshimyimana JP, Phanikumar MS, Piggot AM, Pitkänen T, Robinson C, Sadowsky MJ, Staley C, Staley ZR, Symonds EM, Vogel LJ, Yamahara KM, Whitman RL, Solo-Gabriele HM, Harwood VJ. Weiskerger CJ, et al. Among authors: pitkanen t. Water Res. 2019 Oct 1;162:456-470. doi: 10.1016/j.watres.2019.07.006. Epub 2019 Jul 3. Water Res. 2019. PMID: 31301475 Review.
Detection of SARS-COV-2 variants and their proportions in wastewater samples using next-generation sequencing in Finland.
Lipponen A, Kolehmainen A, Oikarinen S, Hokajärvi AM, Lehto KM, Heikinheimo A, Halkilahti J, Juutinen A, Luomala O, Smura T, Liitsola K, Blomqvist S, Savolainen-Kopra C, Pitkänen T; WastPan Study Group. Lipponen A, et al. Among authors: pitkanen t. Sci Rep. 2024 Apr 2;14(1):7751. doi: 10.1038/s41598-024-58113-8. Sci Rep. 2024. PMID: 38565591 Free PMC article.
Towards monitoring of antimicrobial resistance in the environment: For what reasons, how to implement it, and what are the data needs?
Bengtsson-Palme J, Abramova A, Berendonk TU, Coelho LP, Forslund SK, Gschwind R, Heikinheimo A, Jarquín-Díaz VH, Khan AA, Klümper U, Löber U, Nekoro M, Osińska AD, Ugarcina Perovic S, Pitkänen T, Rødland EK, Ruppé E, Wasteson Y, Wester AL, Zahra R. Bengtsson-Palme J, et al. Among authors: pitkanen t. Environ Int. 2023 Aug;178:108089. doi: 10.1016/j.envint.2023.108089. Epub 2023 Jul 5. Environ Int. 2023. PMID: 37441817 Free article. Review.
Clinically relevant sequence types of carbapenemase-producing Escherichia coli and Klebsiella pneumoniae detected in Finnish wastewater in 2021-2022.
Heljanko V, Tyni O, Johansson V, Virtanen JP, Räisänen K, Lehto KM, Lipponen A, Oikarinen S, Pitkänen T; WastPan Study Group; Heikinheimo A. Heljanko V, et al. Among authors: pitkanen t. Antimicrob Resist Infect Control. 2024 Jan 30;13(1):14. doi: 10.1186/s13756-024-01370-z. Antimicrob Resist Infect Control. 2024. PMID: 38291521 Free PMC article.
Developing wastewater-based surveillance schemes for multiple pathogens: The WastPan project in Finland.
Tiwari A, Lehto KM, Paspaliari DK, Al-Mustapha AI, Sarekoski A, Hokajärvi AM, Länsivaara A, Hyder R, Luomala O, Lipponen A, Oikarinen S, Heikinheimo A, Pitkänen T; WastPan Study Group. Tiwari A, et al. Among authors: pitkanen t. Sci Total Environ. 2024 May 20;926:171401. doi: 10.1016/j.scitotenv.2024.171401. Epub 2024 Mar 10. Sci Total Environ. 2024. PMID: 38467259 Free article.
Bathing Water Quality Monitoring Practices in Europe and the United States.
Tiwari A, Oliver DM, Bivins A, Sherchan SP, Pitkänen T. Tiwari A, et al. Among authors: pitkanen t. Int J Environ Res Public Health. 2021 May 21;18(11):5513. doi: 10.3390/ijerph18115513. Int J Environ Res Public Health. 2021. PMID: 34063910 Free PMC article. Review.
Minimizing errors in RT-PCR detection and quantification of SARS-CoV-2 RNA for wastewater surveillance.
Ahmed W, Simpson SL, Bertsch PM, Bibby K, Bivins A, Blackall LL, Bofill-Mas S, Bosch A, Brandão J, Choi PM, Ciesielski M, Donner E, D'Souza N, Farnleitner AH, Gerrity D, Gonzalez R, Griffith JF, Gyawali P, Haas CN, Hamilton KA, Hapuarachchi HC, Harwood VJ, Haque R, Jackson G, Khan SJ, Khan W, Kitajima M, Korajkic A, La Rosa G, Layton BA, Lipp E, McLellan SL, McMinn B, Medema G, Metcalfe S, Meijer WG, Mueller JF, Murphy H, Naughton CC, Noble RT, Payyappat S, Petterson S, Pitkänen T, Rajal VB, Reyneke B, Roman FA Jr, Rose JB, Rusiñol M, Sadowsky MJ, Sala-Comorera L, Setoh YX, Sherchan SP, Sirikanchana K, Smith W, Steele JA, Sabburg R, Symonds EM, Thai P, Thomas KV, Tynan J, Toze S, Thompson J, Whiteley AS, Wong JCC, Sano D, Wuertz S, Xagoraraki I, Zhang Q, Zimmer-Faust AG, Shanks OC. Ahmed W, et al. Among authors: pitkanen t. Sci Total Environ. 2022 Jan 20;805:149877. doi: 10.1016/j.scitotenv.2021.149877. Epub 2021 Aug 25. Sci Total Environ. 2022. PMID: 34818780 Free PMC article. Review.
Climate Change Impacts on Microbiota in Beach Sand and Water: Looking Ahead.
Brandão J, Weiskerger C, Valério E, Pitkänen T, Meriläinen P, Avolio L, Heaney CD, Sadowsky MJ. Brandão J, et al. Among authors: pitkanen t. Int J Environ Res Public Health. 2022 Jan 27;19(3):1444. doi: 10.3390/ijerph19031444. Int J Environ Res Public Health. 2022. PMID: 35162479 Free PMC article. Review.
A comparative analysis employing a gene- and genome-centric metagenomic approach reveals changes in composition, function, and activity in waterworks with different treatment processes and source water in Finland.
Gomez-Alvarez V, Siponen S, Kauppinen A, Hokajärvi AM, Tiwari A, Sarekoski A, Miettinen IT, Torvinen E, Pitkänen T. Gomez-Alvarez V, et al. Among authors: pitkanen t. Water Res. 2023 Feb 1;229:119495. doi: 10.1016/j.watres.2022.119495. Epub 2022 Dec 14. Water Res. 2023. PMID: 37155494 Free PMC article.
Scenario-based assessment of fecal pathogen sources affecting bathing water quality: novel treatment options to reduce norovirus and Campylobacter infection risks.
Rytkönen A, Meriläinen P, Valkama K, Hokajärvi AM, Ruponen J, Nummela J, Mattila H, Tulonen T, Kivistö R, Pitkänen T. Rytkönen A, et al. Among authors: pitkanen t. Front Microbiol. 2024 Apr 2;15:1353798. doi: 10.3389/fmicb.2024.1353798. eCollection 2024. Front Microbiol. 2024. PMID: 38628869 Free PMC article.
133 results