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3D genomic features across >50 diverse cell types reveal insights into the genomic architecture of childhood obesity.
Trang KB, Pahl MC, Pippin JA, Su C, Littleton SH, Sharma P, Kulkarni NN, Ghanem LR, Terry NA, O'Brien JM, Wagley Y, Hankenson KD, Jermusyk A, Hoskins JW, Amundadottir LT, Xu M, Brown KM, Anderson SA, Yang W, Titchenell PM, Seale P, Cook L, Levings MK, Zemel BS, Chesi A, Wells AD, Grant SFA. Trang KB, et al. Among authors: pippin ja. medRxiv [Preprint]. 2024 Feb 5:2023.08.30.23294092. doi: 10.1101/2023.08.30.23294092. medRxiv. 2024. PMID: 37693606 Free PMC article. Preprint.
Perturbation of the insomnia WDR90 GWAS locus pinpoints rs3752495 as a causal variant influencing distal expression of neighboring gene, PIG-Q.
Sonti S, Littleton SH, Pahl MC, Zimmerman AJ, Chesi A, Palermo J, Lasconi C, Brown EB, Pippin JA, Wells AD, Doldur-Balli F, Pack AI, Gehrman PR, Keene AC, Grant SFA. Sonti S, et al. Among authors: pippin ja. bioRxiv [Preprint]. 2023 Aug 18:2023.08.17.553739. doi: 10.1101/2023.08.17.553739. bioRxiv. 2023. PMID: 37645863 Free PMC article. Updated. Preprint.
Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3' UTR of FAIM2.
Littleton SH, Trang KB, Volpe CM, Cook K, DeBruyne N, Ann Maguire J, Ann Weidekamp M, Boehm K, Chesi A, Pippin JA, Anderson SA, Wells AD, Pahl MC, Grant SFA. Littleton SH, et al. Among authors: pippin ja. bioRxiv [Preprint]. 2023 Aug 22:2023.08.21.553157. doi: 10.1101/2023.08.21.553157. bioRxiv. 2023. PMID: 37662342 Free PMC article. Updated. Preprint.
Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3' UTR of FAIM2.
Littleton SH, Trang KB, Volpe CM, Cook K, DeBruyne N, Maguire JA, Weidekamp MA, Hodge KM, Boehm K, Lu S, Chesi A, Bradfield JP, Pippin JA, Anderson SA, Wells AD, Pahl MC, Grant SFA. Littleton SH, et al. Among authors: pippin ja. Cell Genom. 2024 May 8;4(5):100556. doi: 10.1016/j.xgen.2024.100556. Epub 2024 May 1. Cell Genom. 2024. PMID: 38697123 Free PMC article.
Osteoporosis GWAS-implicated DNM3 locus contextually regulates osteoblastic and chondrogenic fate of mesenchymal stem/progenitor cells through oscillating miR-199a-5p levels.
Kaur G, Pippin JA, Chang S, Redmond J, Chesi A, Wells AD, Maerz T, Grant SFA, Coleman RM, Hankenson KD, Wagley Y. Kaur G, et al. Among authors: pippin ja. JBMR Plus. 2024 Apr 10;8(5):ziae051. doi: 10.1093/jbmrpl/ziae051. eCollection 2024 May. JBMR Plus. 2024. PMID: 38686038 Free PMC article.
Perturbation of the insomnia WDR90 GWAS locus pinpoints rs3752495 as a causal variant influencing distal expression of neighboring gene, PIG-Q.
Sonti S, Littleton SH, Pahl MC, Zimmerman AJ, Chesi A, Palermo J, Lasconi C, Brown EB, Pippin JA, Wells AD, Doldur-Balli F, Pack AI, Gehrman PR, Keene AC, Grant SFA. Sonti S, et al. Among authors: pippin ja. Sleep. 2024 Apr 4:zsae085. doi: 10.1093/sleep/zsae085. Online ahead of print. Sleep. 2024. PMID: 38571402
GWAS-informed data integration and non-coding CRISPRi screen illuminate genetic etiology of bone mineral density.
Conery M, Pippin JA, Wagley Y, Trang K, Pahl MC, Villani DA, Favazzo LJ, Ackert-Bicknell CL, Zuscik MJ, Katsevich E, Wells AD, Zemel BS, Voight BF, Hankenson KD, Chesi A, Grant SFA. Conery M, et al. Among authors: pippin ja. bioRxiv [Preprint]. 2024 Mar 20:2024.03.19.585778. doi: 10.1101/2024.03.19.585778. bioRxiv. 2024. PMID: 38562830 Free PMC article. Preprint.
Patient-derived Colonoids From Disease-spared Tissue Retain Inflammatory Bowel Disease-specific Transcriptomic Signatures.
Karakasheva TA, Zhou Y, Xie HM, Soto GE, Johnson TD, Stoltz MA, Roach DM, Nema N, Umeweni CN, Naughton K, Dolinsky L, Pippin JA, Wells AD, Grant SFA, Ghanem L, Terry N, Muir AB, Hamilton KE. Karakasheva TA, et al. Among authors: pippin ja. Gastro Hep Adv. 2023;2(6):830-842. doi: 10.1016/j.gastha.2023.05.003. Epub 2023 May 25. Gastro Hep Adv. 2023. PMID: 37736163 Free PMC article.
Variant-to-gene mapping followed by cross-species genetic screening identifies GPI-anchor biosynthesis as a regulator of sleep.
Palermo J, Chesi A, Zimmerman A, Sonti S, Pahl MC, Lasconi C, Brown EB, Pippin JA, Wells AD, Doldur-Balli F, Mazzotti DR, Pack AI, Gehrman PR, Grant SFA, Keene AC. Palermo J, et al. Among authors: pippin ja. Sci Adv. 2023 Jan 6;9(1):eabq0844. doi: 10.1126/sciadv.abq0844. Epub 2023 Jan 6. Sci Adv. 2023. PMID: 36608130 Free PMC article.
27 results