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ResFinder 4.0 for predictions of phenotypes from genotypes.
Bortolaia V, Kaas RS, Ruppe E, Roberts MC, Schwarz S, Cattoir V, Philippon A, Allesoe RL, Rebelo AR, Florensa AF, Fagelhauer L, Chakraborty T, Neumann B, Werner G, Bender JK, Stingl K, Nguyen M, Coppens J, Xavier BB, Malhotra-Kumar S, Westh H, Pinholt M, Anjum MF, Duggett NA, Kempf I, Nykäsenoja S, Olkkola S, Wieczorek K, Amaro A, Clemente L, Mossong J, Losch S, Ragimbeau C, Lund O, Aarestrup FM. Bortolaia V, et al. Among authors: pinholt m. J Antimicrob Chemother. 2020 Dec 1;75(12):3491-3500. doi: 10.1093/jac/dkaa345. J Antimicrob Chemother. 2020. PMID: 32780112 Free PMC article.
No specific time window distinguishes between community-, healthcare-, and hospital-acquired bacteremia, but they are prognostically robust.
Gradel KO, Nielsen SL, Pedersen C, Knudsen JD, Østergaard C, Arpi M, Jensen TG, Kolmos HJ, Schønheyder HC, Søgaard M, Lassen AT; Danish Collaborative Bacteraemia Network; Danish Observational Registry of Infectious Syndromes. Gradel KO, et al. Infect Control Hosp Epidemiol. 2014 Dec;35(12):1474-82. doi: 10.1086/678593. Epub 2014 Oct 31. Infect Control Hosp Epidemiol. 2014. PMID: 25419769
Multiple hospital outbreaks of vanA Enterococcus faecium in Denmark, 2012-13, investigated by WGS, MLST and PFGE.
Pinholt M, Larner-Svensson H, Littauer P, Moser CE, Pedersen M, Lemming LE, Ejlertsen T, Søndergaard TS, Holzknecht BJ, Justesen US, Dzajic E, Olsen SS, Nielsen JB, Worning P, Hammerum AM, Westh H, Jakobsen L. Pinholt M, et al. J Antimicrob Chemother. 2015 Sep;70(9):2474-82. doi: 10.1093/jac/dkv142. Epub 2015 Jun 1. J Antimicrob Chemother. 2015. PMID: 26031466
Emergence of vanA Enterococcus faecium in Denmark, 2005-15.
Hammerum AM, Baig S, Kamel Y, Roer L, Pinholt M, Gumpert H, Holzknecht B, Røder B, Justesen US, Samulioniené J, Kjærsgaard M, Østergaard C, Holm A, Dzajic E, Søndergaard TS, Gaini S, Edquist P, Alm E, Lilje B, Westh H, Stegger M, Hasman H. Hammerum AM, et al. Among authors: pinholt m. J Antimicrob Chemother. 2017 Aug 1;72(8):2184-2190. doi: 10.1093/jac/dkx138. J Antimicrob Chemother. 2017. PMID: 28541565
Susceptibility of vancomycin-resistant and -sensitive Enterococcus faecium obtained from Danish hospitals to benzalkonium chloride, chlorhexidine and hydrogen peroxide biocides.
Alotaibi SMI, Ayibiekea A, Pedersen AF, Jakobsen L, Pinholt M, Gumpert H, Hammerum AM, Westh H, Ingmer H. Alotaibi SMI, et al. Among authors: pinholt m. J Med Microbiol. 2017 Dec;66(12):1744-1751. doi: 10.1099/jmm.0.000642. Epub 2017 Nov 14. J Med Microbiol. 2017. PMID: 29134935
WGS of 1058 Enterococcus faecium from Copenhagen, Denmark, reveals rapid clonal expansion of vancomycin-resistant clone ST80 combined with widespread dissemination of a vanA-containing plasmid and acquisition of a heterogeneous accessory genome.
Pinholt M, Bayliss SC, Gumpert H, Worning P, Jensen VVS, Pedersen M, Feil EJ, Westh H. Pinholt M, et al. J Antimicrob Chemother. 2019 Jul 1;74(7):1776-1785. doi: 10.1093/jac/dkz118. J Antimicrob Chemother. 2019. PMID: 30929020
46 results