Pimanda J - Search Results

1

Human endogenous retroviruses form a reservoir of T cell targets in hematological cancers.

Saini SK, Ørskov AD, Bjerregaard AM, Unnikrishnan A, Holmberg-Thydén S, Borch A, Jensen KV, Anande G, Bentzen AK, Marquard AM, Tamhane T, Treppendahl MB, Gang AO, Dufva IH, Szallasi Z, Ternette N, Pedersen AG, Eklund AC, Pimanda J, Grønbæk K, Hadrup SR. Saini SK, et al. Among authors: pimanda j. Nat Commun. 2020 Nov 9;11(1):5660. doi: 10.1038/s41467-020-19464-8. Nat Commun. 2020. PMID: 33168830 Free PMC article.

2

Signal analysis for genome-wide maps of histone modifications measured by ChIP-seq.

Beck D, Brandl MB, Boelen L, Unnikrishnan A, Pimanda JE, Wong JW. Beck D, et al. Bioinformatics. 2012 Apr 15;28(8):1062-9. doi: 10.1093/bioinformatics/bts085. Epub 2012 Feb 17. Bioinformatics. 2012. PMID: 22345622

3

Genome-wide analysis of transcriptional regulators in human HSPCs reveals a densely interconnected network of coding and noncoding genes.

Beck D, Thoms JA, Perera D, Schütte J, Unnikrishnan A, Knezevic K, Kinston SJ, Wilson NK, O'Brien TA, Göttgens B, Wong JW, Pimanda JE. Beck D, et al. Among authors: pimanda je. Blood. 2013 Oct 3;122(14):e12-22. doi: 10.1182/blood-2013-03-490425. Epub 2013 Aug 23. Blood. 2013. PMID: 23974199 Free article.

4

Differential DNA repair underlies mutation hotspots at active promoters in cancer genomes.

Perera D, Poulos RC, Shah A, Beck D, Pimanda JE, Wong JW. Perera D, et al. Nature. 2016 Apr 14;532(7598):259-63. doi: 10.1038/nature17437. Nature. 2016. PMID: 27075100

5

A quantitative proteomics approach identifies ETV6 and IKZF1 as new regulators of an ERG-driven transcriptional network.

Unnikrishnan A, Guan YF, Huang Y, Beck D, Thoms JA, Peirs S, Knezevic K, Ma S, de Walle IV, de Jong I, Ali Z, Zhong L, Raftery MJ, Taghon T, Larsson J, MacKenzie KL, Van Vlierberghe P, Wong JW, Pimanda JE. Unnikrishnan A, et al. Among authors: pimanda je. Nucleic Acids Res. 2016 Dec 15;44(22):10644-10661. doi: 10.1093/nar/gkw804. Epub 2016 Sep 6. Nucleic Acids Res. 2016. PMID: 27604872 Free PMC article.

6

Functional Mutations Form at CTCF-Cohesin Binding Sites in Melanoma Due to Uneven Nucleotide Excision Repair across the Motif.

Poulos RC, Thoms JAI, Guan YF, Unnikrishnan A, Pimanda JE, Wong JWH. Poulos RC, et al. Cell Rep. 2016 Dec 13;17(11):2865-2872. doi: 10.1016/j.celrep.2016.11.055. Cell Rep. 2016. PMID: 27974201 Free article.

7

The non-coding RNA landscape of human hematopoiesis and leukemia.

Schwarzer A, Emmrich S, Schmidt F, Beck D, Ng M, Reimer C, Adams FF, Grasedieck S, Witte D, Käbler S, Wong JWH, Shah A, Huang Y, Jammal R, Maroz A, Jongen-Lavrencic M, Schambach A, Kuchenbauer F, Pimanda JE, Reinhardt D, Heckl D, Klusmann JH. Schwarzer A, et al. Nat Commun. 2017 Aug 9;8(1):218. doi: 10.1038/s41467-017-00212-4. Nat Commun. 2017. PMID: 28794406 Free PMC article.

8

AZA-MS: a novel multiparameter mass spectrometry method to determine the intracellular dynamics of azacitidine therapy in vivo.

Unnikrishnan A, Vo ANQ, Pickford R, Raftery MJ, Nunez AC, Verma A, Hesson LB, Pimanda JE. Unnikrishnan A, et al. Among authors: pimanda je. Leukemia. 2018 Apr;32(4):900-910. doi: 10.1038/leu.2017.340. Epub 2017 Nov 29. Leukemia. 2018. PMID: 29249821 Free PMC article.

9

Srsf2^P95H initiates myeloid bias and myelodysplastic/myeloproliferative syndrome from hemopoietic stem cells.

Smeets MF, Tan SY, Xu JJ, Anande G, Unnikrishnan A, Chalk AM, Taylor SR, Pimanda JE, Wall M, Purton LE, Walkley CR. Smeets MF, et al. Blood. 2018 Aug 9;132(6):608-621. doi: 10.1182/blood-2018-04-845602. Epub 2018 Jun 14. Blood. 2018. PMID: 29903888 Free article.

10

HMGA2 promotes long-term engraftment and myeloerythroid differentiation of human hematopoietic stem and progenitor cells.

Kumar P, Beck D, Galeev R, Thoms JAI, Talkhoncheh MS, de Jong I, Unnikrishnan A, Baudet A, Subramaniam A, Pimanda JE, Larsson J. Kumar P, et al. Among authors: pimanda je. Blood Adv. 2019 Feb 26;3(4):681-691. doi: 10.1182/bloodadvances.2018023986. Blood Adv. 2019. PMID: 30808686 Free PMC article.

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