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A big data approach to metagenomics for all-food-sequencing.
Kobus R, Abuín JM, Müller A, Hellmann SL, Pichel JC, Pena TF, Hildebrandt A, Hankeln T, Schmidt B. Kobus R, et al. Among authors: pichel jc. BMC Bioinformatics. 2020 Mar 12;21(1):102. doi: 10.1186/s12859-020-3429-6. BMC Bioinformatics. 2020. PMID: 32164527 Free PMC article.
PASTASpark: multiple sequence alignment meets Big Data.
Abuín JM, Pena TF, Pichel JC. Abuín JM, et al. Among authors: pichel jc. Bioinformatics. 2017 Sep 15;33(18):2948-2950. doi: 10.1093/bioinformatics/btx354. Bioinformatics. 2017. PMID: 28582480
Mycobacterium tuberculosis Decaprenylphosphoryl-β-d-ribose Oxidase Inhibitors: Expeditious Reconstruction of Suboptimal Hits into a Series with Potent in Vivo Activity.
Borthwick JA, Alemparte C, Wall I, Whitehurst BC, Argyrou A, Burley G, de Dios-Anton P, Guijarro L, Monteiro MC, Ortega F, Suckling CJ, Pichel JC, Cacho M, Young RJ. Borthwick JA, et al. Among authors: pichel jc. J Med Chem. 2020 Mar 12;63(5):2557-2576. doi: 10.1021/acs.jmedchem.9b01561. Epub 2020 Jan 22. J Med Chem. 2020. PMID: 31922409 Free article.