Petzold K - Search Results

1

Visualizing transient low-populated structures of RNA.

Dethoff EA, Petzold K, Chugh J, Casiano-Negroni A, Al-Hashimi HM. Dethoff EA, et al. Among authors: petzold k. Nature. 2012 Nov 29;491(7426):724-8. doi: 10.1038/nature11498. Epub 2012 Oct 7. Nature. 2012. PMID: 23041928 Free PMC article.

2

RNA structure: Adding a second dimension.

Petzold K, Al-Hashimi HM. Petzold K, et al. Nat Chem. 2011 Nov 23;3(12):913-5. doi: 10.1038/nchem.1209. Nat Chem. 2011. PMID: 22109268 No abstract available.

3

Visualizing transient Watson-Crick-like mispairs in DNA and RNA duplexes.

Kimsey IJ, Petzold K, Sathyamoorthy B, Stein ZW, Al-Hashimi HM. Kimsey IJ, et al. Among authors: petzold k. Nature. 2015 Mar 19;519(7543):315-20. doi: 10.1038/nature14227. Epub 2015 Mar 11. Nature. 2015. PMID: 25762137 Free PMC article.

4

Modulating RNA Alignment Using Directional Dynamic Kinks: Application in Determining an Atomic-Resolution Ensemble for a Hairpin using NMR Residual Dipolar Couplings.

Salmon L, Giambaşu GM, Nikolova EN, Petzold K, Bhattacharya A, Case DA, Al-Hashimi HM. Salmon L, et al. Among authors: petzold k. J Am Chem Soc. 2015 Oct 14;137(40):12954-65. doi: 10.1021/jacs.5b07229. Epub 2015 Sep 29. J Am Chem Soc. 2015. PMID: 26306428 Free PMC article.

5

Mutate-and-chemical-shift-fingerprint (MCSF) to characterize excited states in RNA using NMR spectroscopy.

Riad M, Hopkins N, Baronti L, Karlsson H, Schlagnitweit J, Petzold K. Riad M, et al. Among authors: petzold k. Nat Protoc. 2021 Nov;16(11):5146-5170. doi: 10.1038/s41596-021-00606-1. Epub 2021 Oct 4. Nat Protoc. 2021. PMID: 34608336 Review.

6

Conserved nucleotides in an RNA essential for hepatitis B virus replication show distinct mobility patterns.

Petzold K, Duchardt E, Flodell S, Larsson G, Kidd-Ljunggren K, Wijmenga S, Schleucher J. Petzold K, et al. Nucleic Acids Res. 2007;35(20):6854-61. doi: 10.1093/nar/gkm774. Epub 2007 Oct 11. Nucleic Acids Res. 2007. PMID: 17933777 Free PMC article.

7

Efficient Detection of Structure and Dynamics in Unlabeled RNAs: The SELOPE Approach.

Schlagnitweit J, Steiner E, Karlsson H, Petzold K. Schlagnitweit J, et al. Among authors: petzold k. Chemistry. 2018 Apr 20;24(23):6067-6070. doi: 10.1002/chem.201800992. Epub 2018 Mar 25. Chemistry. 2018. PMID: 29504639 Free PMC article.

8

RNA Dynamics by NMR Spectroscopy.

Marušič M, Schlagnitweit J, Petzold K. Marušič M, et al. Among authors: petzold k. Chembiochem. 2019 Nov 4;20(21):2685-2710. doi: 10.1002/cbic.201900072. Epub 2019 Jul 17. Chembiochem. 2019. PMID: 30997719 Free PMC article. Review.

9

A two-dimensional replica-exchange molecular dynamics method for simulating RNA folding using sparse experimental restraints.

Ebrahimi P, Kaur S, Baronti L, Petzold K, Chen AA. Ebrahimi P, et al. Among authors: petzold k. Methods. 2019 Jun 1;162-163:96-107. doi: 10.1016/j.ymeth.2019.05.001. Epub 2019 May 3. Methods. 2019. PMID: 31059830

10

Base-pair conformational switch modulates miR-34a targeting of Sirt1 mRNA.

Baronti L, Guzzetti I, Ebrahimi P, Friebe Sandoz S, Steiner E, Schlagnitweit J, Fromm B, Silva L, Fontana C, Chen AA, Petzold K. Baronti L, et al. Among authors: petzold k. Nature. 2020 Jul;583(7814):139-144. doi: 10.1038/s41586-020-2336-3. Epub 2020 May 27. Nature. 2020. PMID: 32461691

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