Pett-Ridge J - Search Results

1

Unraveling the functional dark matter through global metagenomics.

Pavlopoulos GA, Baltoumas FA, Liu S, Selvitopi O, Camargo AP, Nayfach S, Azad A, Roux S, Call L, Ivanova NN, Chen IM, Paez-Espino D, Karatzas E; Novel Metagenome Protein Families Consortium; Iliopoulos I, Konstantinidis K, Tiedje JM, Pett-Ridge J, Baker D, Visel A, Ouzounis CA, Ovchinnikov S, Buluç A, Kyrpides NC. Pavlopoulos GA, et al. Among authors: pett ridge j. Nature. 2023 Oct;622(7983):594-602. doi: 10.1038/s41586-023-06583-7. Epub 2023 Oct 11. Nature. 2023. PMID: 37821698 Free PMC article.

2

Fixation and fate of C and N in the cyanobacterium Trichodesmium using nanometer-scale secondary ion mass spectrometry.

Finzi-Hart JA, Pett-Ridge J, Weber PK, Popa R, Fallon SJ, Gunderson T, Hutcheon ID, Nealson KH, Capone DG. Finzi-Hart JA, et al. Proc Natl Acad Sci U S A. 2009 Apr 14;106(15):6345-50. doi: 10.1073/pnas.0810547106. Epub 2009 Mar 30. Proc Natl Acad Sci U S A. 2009. PMID: 19332780 Free PMC article.

3

Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay.

Burow LC, Woebken D, Bebout BM, McMurdie PJ, Singer SW, Pett-Ridge J, Prufert-Bebout L, Spormann AM, Weber PK, Hoehler TM. Burow LC, et al. ISME J. 2012 Apr;6(4):863-74. doi: 10.1038/ismej.2011.142. Epub 2011 Oct 20. ISME J. 2012. PMID: 22011721 Free PMC article.

4

A bacterium that can grow by using arsenic instead of phosphorus.

Wolfe-Simon F, Switzer Blum J, Kulp TR, Gordon GW, Hoeft SE, Pett-Ridge J, Stolz JF, Webb SM, Weber PK, Davies PC, Anbar AD, Oremland RS. Wolfe-Simon F, et al. Science. 2011 Jun 3;332(6034):1163-6. doi: 10.1126/science.1197258. Epub 2010 Dec 2. Science. 2011. PMID: 21127214

5

Identification of Desulfobacterales as primary hydrogenotrophs in a complex microbial mat community.

Burow LC, Woebken D, Marshall IP, Singer SW, Pett-Ridge J, Prufert-Bebout L, Spormann AM, Bebout BM, Weber PK, Hoehler TM. Burow LC, et al. Geobiology. 2014 May;12(3):221-30. doi: 10.1111/gbi.12080. Geobiology. 2014. PMID: 24730641

6

Twelve testable hypotheses on the geobiology of weathering.

Brantley SL, Megonigal JP, Scatena FN, Balogh-Brunstad Z, Barnes RT, Bruns MA, Van Cappellen P, Dontsova K, Hartnett HE, Hartshorn AS, Heimsath A, Herndon E, Jin L, Keller CK, Leake JR, McDowell WH, Meinzer FC, Mozdzer TJ, Petsch S, Pett-Ridge J, Pregitzer KS, Raymond PA, Riebe CS, Shumaker K, Sutton-Grier A, Walter R, Yoo K. Brantley SL, et al. Geobiology. 2011 Mar;9(2):140-65. doi: 10.1111/j.1472-4669.2010.00264.x. Epub 2011 Jan 14. Geobiology. 2011. PMID: 21231992

7

Nitrogen mineralization and assimilation at millimeter scales.

Myrold DD, Pett-Ridge J, Bottomley PJ. Myrold DD, et al. Methods Enzymol. 2011;496:91-114. doi: 10.1016/B978-0-12-386489-5.00004-X. Methods Enzymol. 2011. PMID: 21514461 Review.

8

Redox fluctuation structures microbial communities in a wet tropical soil.

Pett-Ridge J, Firestone MK. Pett-Ridge J, et al. Appl Environ Microbiol. 2005 Nov;71(11):6998-7007. doi: 10.1128/AEM.71.11.6998-7007.2005. Appl Environ Microbiol. 2005. PMID: 16269735 Free PMC article.

9

High-throughput isotopic analysis of RNA microarrays to quantify microbial resource use.

Mayali X, Weber PK, Brodie EL, Mabery S, Hoeprich PD, Pett-Ridge J. Mayali X, et al. ISME J. 2012 Jun;6(6):1210-21. doi: 10.1038/ismej.2011.175. Epub 2011 Dec 8. ISME J. 2012. PMID: 22158395 Free PMC article.

10

Compartmentalized microbial composition, oxygen gradients and nitrogen fixation in the gut of Odontotaenius disjunctus.

Ceja-Navarro JA, Nguyen NH, Karaoz U, Gross SR, Herman DJ, Andersen GL, Bruns TD, Pett-Ridge J, Blackwell M, Brodie EL. Ceja-Navarro JA, et al. ISME J. 2014 Jan;8(1):6-18. doi: 10.1038/ismej.2013.134. Epub 2013 Aug 29. ISME J. 2014. PMID: 23985746 Free PMC article.

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