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A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing.
Petrillo M, Fabbri M, Kagkli DM, Querci M, Van den Eede G, Alm E, Aytan-Aktug D, Capella-Gutierrez S, Carrillo C, Cestaro A, Chan KG, Coque T, Endrullat C, Gut I, Hammer P, Kay GL, Madec JY, Mather AE, McHardy AC, Naas T, Paracchini V, Peter S, Pightling A, Raffael B, Rossen J, Ruppé E, Schlaberg R, Vanneste K, Weber LM, Westh H, Angers-Loustau A. Petrillo M, et al. F1000Res. 2021 Feb 8;10:80. doi: 10.12688/f1000research.39214.2. eCollection 2021. F1000Res. 2021. PMID: 35847383 Free PMC article.
Development, optimization, and single laboratory validation of an event-specific real-time PCR method for the detection and quantification of Golden Rice 2 using a novel taxon-specific assay.
Jacchia S, Nardini E, Savini C, Petrillo M, Angers-Loustau A, Shim JH, Trijatmiko K, Kreysa J, Mazzara M. Jacchia S, et al. Among authors: petrillo m. J Agric Food Chem. 2015 Feb 18;63(6):1711-21. doi: 10.1021/jf505516y. Epub 2015 Feb 6. J Agric Food Chem. 2015. PMID: 25588469
Molecular characterization of an unauthorized genetically modified Bacillus subtilis production strain identified in a vitamin B2 feed additive.
Paracchini V, Petrillo M, Reiting R, Angers-Loustau A, Wahler D, Stolz A, Schönig B, Matthies A, Bendiek J, Meinel DM, Pecoraro S, Busch U, Patak A, Kreysa J, Grohmann L. Paracchini V, et al. Among authors: petrillo m. Food Chem. 2017 Sep 1;230:681-689. doi: 10.1016/j.foodchem.2017.03.042. Epub 2017 Mar 9. Food Chem. 2017. PMID: 28407967 Free PMC article.
Novel nuclear barcode regions for the identification of flatfish species.
Paracchini V, Petrillo M, Lievens A, Puertas Gallardo A, Martinsohn JT, Hofherr J, Maquet A, Silva APB, Kagkli DM, Querci M, Patak A, Angers-Loustau A. Paracchini V, et al. Among authors: petrillo m. Food Control. 2017 Sep;79:297-308. doi: 10.1016/j.foodcont.2017.04.009. Food Control. 2017. PMID: 28867876 Free PMC article.
The challenges of designing a benchmark strategy for bioinformatics pipelines in the identification of antimicrobial resistance determinants using next generation sequencing technologies.
Angers-Loustau A, Petrillo M, Bengtsson-Palme J, Berendonk T, Blais B, Chan KG, Coque TM, Hammer P, Heß S, Kagkli DM, Krumbiegel C, Lanza VF, Madec JY, Naas T, O'Grady J, Paracchini V, Rossen JWA, Ruppé E, Vamathevan J, Venturi V, Van den Eede G. Angers-Loustau A, et al. Among authors: petrillo m. F1000Res. 2018 Apr 13;7:ISCB Comm J-459. doi: 10.12688/f1000research.14509.2. eCollection 2018. F1000Res. 2018. PMID: 30026930 Free PMC article. Review.
Nuclear DNA barcodes for cod identification in mildly-treated and processed food products.
Paracchini V, Petrillo M, Lievens A, Kagkli DM, Angers-Loustau A. Paracchini V, et al. Among authors: petrillo m. Food Addit Contam Part A Chem Anal Control Expo Risk Assess. 2019 Jan;36(1):1-14. doi: 10.1080/19440049.2018.1556402. Epub 2019 Jan 11. Food Addit Contam Part A Chem Anal Control Expo Risk Assess. 2019. PMID: 30633651
473 results