Peters B - Search Results

1

BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes.

Jespersen MC, Peters B, Nielsen M, Marcatili P. Jespersen MC, et al. Among authors: peters b. Nucleic Acids Res. 2017 Jul 3;45(W1):W24-W29. doi: 10.1093/nar/gkx346. Nucleic Acids Res. 2017. PMID: 28472356 Free PMC article.

2

Ab and T cell epitopes of influenza A virus, knowledge and opportunities.

Bui HH, Peters B, Assarsson E, Mbawuike I, Sette A. Bui HH, et al. Among authors: peters b. Proc Natl Acad Sci U S A. 2007 Jan 2;104(1):246-51. doi: 10.1073/pnas.0609330104. Proc Natl Acad Sci U S A. 2007. PMID: 17200302 Free PMC article.

3

Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools.

Greenbaum JA, Andersen PH, Blythe M, Bui HH, Cachau RE, Crowe J, Davies M, Kolaskar AS, Lund O, Morrison S, Mumey B, Ofran Y, Pellequer JL, Pinilla C, Ponomarenko JV, Raghava GP, van Regenmortel MH, Roggen EL, Sette A, Schlessinger A, Sollner J, Zand M, Peters B. Greenbaum JA, et al. Among authors: peters b. J Mol Recognit. 2007 Mar-Apr;20(2):75-82. doi: 10.1002/jmr.815. J Mol Recognit. 2007. PMID: 17205610 Review.

4

NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence.

Nielsen M, Lundegaard C, Blicher T, Lamberth K, Harndahl M, Justesen S, Røder G, Peters B, Sette A, Lund O, Buus S. Nielsen M, et al. Among authors: peters b. PLoS One. 2007 Aug 29;2(8):e796. doi: 10.1371/journal.pone.0000796. PLoS One. 2007. PMID: 17726526 Free PMC article.

5

Immune epitope database analysis resource (IEDB-AR).

Zhang Q, Wang P, Kim Y, Haste-Andersen P, Beaver J, Bourne PE, Bui HH, Buus S, Frankild S, Greenbaum J, Lund O, Lundegaard C, Nielsen M, Ponomarenko J, Sette A, Zhu Z, Peters B. Zhang Q, et al. Among authors: peters b. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W513-8. doi: 10.1093/nar/gkn254. Epub 2008 May 31. Nucleic Acids Res. 2008. PMID: 18515843 Free PMC article.

6

Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: NetMHCIIpan.

Nielsen M, Lundegaard C, Blicher T, Peters B, Sette A, Justesen S, Buus S, Lund O. Nielsen M, et al. Among authors: peters b. PLoS Comput Biol. 2008 Jul 4;4(7):e1000107. doi: 10.1371/journal.pcbi.1000107. PLoS Comput Biol. 2008. PMID: 18604266 Free PMC article.

7

NetMHCpan, a method for MHC class I binding prediction beyond humans.

Hoof I, Peters B, Sidney J, Pedersen LE, Sette A, Lund O, Buus S, Nielsen M. Hoof I, et al. Among authors: peters b. Immunogenetics. 2009 Jan;61(1):1-13. doi: 10.1007/s00251-008-0341-z. Epub 2008 Nov 12. Immunogenetics. 2009. PMID: 19002680 Free PMC article.

8

ElliPro: a new structure-based tool for the prediction of antibody epitopes.

Ponomarenko J, Bui HH, Li W, Fusseder N, Bourne PE, Sette A, Peters B. Ponomarenko J, et al. Among authors: peters b. BMC Bioinformatics. 2008 Dec 2;9:514. doi: 10.1186/1471-2105-9-514. BMC Bioinformatics. 2008. PMID: 19055730 Free PMC article.

9

The immune epitope database 2.0.

Vita R, Zarebski L, Greenbaum JA, Emami H, Hoof I, Salimi N, Damle R, Sette A, Peters B. Vita R, et al. Among authors: peters b. Nucleic Acids Res. 2010 Jan;38(Database issue):D854-62. doi: 10.1093/nar/gkp1004. Epub 2009 Nov 11. Nucleic Acids Res. 2010. PMID: 19906713 Free PMC article.

10

Limitations of Ab initio predictions of peptide binding to MHC class II molecules.

Zhang H, Wang P, Papangelopoulos N, Xu Y, Sette A, Bourne PE, Lund O, Ponomarenko J, Nielsen M, Peters B. Zhang H, et al. Among authors: peters b. PLoS One. 2010 Feb 17;5(2):e9272. doi: 10.1371/journal.pone.0009272. PLoS One. 2010. PMID: 20174654 Free PMC article.

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