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A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa.
PLoS Comput Biol. 2018 Apr 9;14(4):e1006053. doi: 10.1371/journal.pcbi.1006053. eCollection 2018 Apr.
PLoS Comput Biol. 2018.
PMID: 29630593
Free PMC article.
Transfer learning across ontologies for phenome-genome association prediction.
Petegrosso R, Park S, Hwang TH, Kuang R.
Petegrosso R, et al.
Bioinformatics. 2017 Feb 15;33(4):529-536. doi: 10.1093/bioinformatics/btw649.
Bioinformatics. 2017.
PMID: 27797759
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Scalable remote homology detection and fold recognition in massive protein networks.
Petegrosso R, Li Z, Srour MA, Saad Y, Zhang W, Kuang R.
Petegrosso R, et al.
Proteins. 2019 Jun;87(6):478-491. doi: 10.1002/prot.25669. Epub 2019 Feb 22.
Proteins. 2019.
PMID: 30714638
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Machine learning and statistical methods for clustering single-cell RNA-sequencing data.
Petegrosso R, Li Z, Kuang R.
Petegrosso R, et al.
Brief Bioinform. 2020 Jul 15;21(4):1209-1223. doi: 10.1093/bib/bbz063.
Brief Bioinform. 2020.
PMID: 31243426
Review.
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A large-scale comparative study of isoform expressions measured on four platforms.
Zhang W, Petegrosso R, Chang JW, Sun J, Yong J, Chien J, Kuang R.
Zhang W, et al. Among authors: petegrosso r.
BMC Genomics. 2020 Mar 30;21(1):272. doi: 10.1186/s12864-020-6643-8.
BMC Genomics. 2020.
PMID: 32228441
Free PMC article.
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Hierarchical Canonical Correlation Analysis Reveals Phenotype, Genotype, and Geoclimate Associations in Plants.
Petegrosso R, Song T, Kuang R.
Petegrosso R, et al.
Plant Phenomics. 2020 Mar 31;2020:1969142. doi: 10.34133/2020/1969142. eCollection 2020.
Plant Phenomics. 2020.
PMID: 33313545
Free PMC article.
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Obesity-induced protein carbonylation in murine adipose tissue regulates the DNA-binding domain of nuclear zinc finger proteins.
Hauck AK, Zhou T, Hahn W, Petegrosso R, Kuang R, Chen Y, Bernlohr DA.
Hauck AK, et al. Among authors: petegrosso r.
J Biol Chem. 2018 Aug 31;293(35):13464-13476. doi: 10.1074/jbc.RA118.003469. Epub 2018 Jul 16.
J Biol Chem. 2018.
PMID: 30012885
Free PMC article.
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