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Comparison of next generation technologies and bioinformatics pipelines for capsular typing of Streptococcus pneumoniae.
J Clin Microbiol. 2023 Dec 19;61(12):e0074123. doi: 10.1128/jcm.00741-23. Epub 2023 Nov 21.
J Clin Microbiol. 2023.
PMID: 38092657
Free PMC article.
Trends in invasive bacterial diseases during the first 2 years of the COVID-19 pandemic: analyses of prospective surveillance data from 30 countries and territories in the IRIS Consortium.
Shaw D, Abad R, Amin-Chowdhury Z, Bautista A, Bennett D, Broughton K, Cao B, Casanova C, Choi EH, Chu YW, Claus H, Coelho J, Corcoran M, Cottrell S, Cunney R, Cuypers L, Dalby T, Davies H, de Gouveia L, Deghmane AE, Demczuk W, Desmet S, Domenech M, Drew R, du Plessis M, Duarte C, Erlendsdóttir H, Fry NK, Fuursted K, Hale T, Henares D, Henriques-Normark B, Hilty M, Hoffmann S, Humphreys H, Ip M, Jacobsson S, Johnson C, Johnston J, Jolley KA, Kawabata A, Kozakova J, Kristinsson KG, Krizova P, Kuch A, Ladhani S, Lâm TT, León ME, Lindholm L, Litt D, Maiden MCJ, Martin I, Martiny D, Mattheus W, McCarthy ND, Meehan M, Meiring S, Mölling P, Morfeldt E, Morgan J, Mulhall R, Muñoz-Almagro C, Murdoch D, Murphy J, Musilek M, Mzabi A, Novakova L, Oftadeh S, Perez-Argüello A, Pérez-Vázquez M, Perrin M, Perry M, Prevost B, Roberts M, Rokney A, Ron M, Sanabria OM, Scott KJ, Sheppard C, Siira L, Sintchenko V, Skoczyńska A, Sloan M, Slotved HC, Smith AJ, Steens A, Taha MK, Toropainen M, Tzanakaki G, Vainio A, van der Linden MPG, van Sorge NM, Varon E, Vohrnova S, von Gottberg A, Yuste J, Zanella R, Zhou F, Brueggemann AB.
Shaw D, et al. Among authors: perez arguello a.
Lancet Digit Health. 2023 Sep;5(9):e582-e593. doi: 10.1016/S2589-7500(23)00108-5. Epub 2023 Jul 27.
Lancet Digit Health. 2023.
PMID: 37516557
Free PMC article.
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Differential nasopharyngeal microbiota composition in children according to respiratory health status.
Henares D, Brotons P, de Sevilla MF, Fernandez-Lopez A, Hernandez-Bou S, Perez-Argüello A, Mira A, Muñoz-Almagro C, Cabrera-Rubio R.
Henares D, et al. Among authors: perez arguello a.
Microb Genom. 2021 Oct;7(10):000661. doi: 10.1099/mgen.0.000661.
Microb Genom. 2021.
PMID: 34699345
Free PMC article.
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Validation and implementation of a direct RT-qPCR method for rapid screening of SARS-CoV-2 infection by using non-invasive saliva samples.
Brotons P, Perez-Argüello A, Launes C, Torrents F, Subirats MP, Saucedo J, Claverol J, Garcia-Garcia JJ, Rodas G, Fumado V, Jordan I, Gratacos E, Bassat Q, Muñoz-Almagro C.
Brotons P, et al. Among authors: perez arguello a.
Int J Infect Dis. 2021 Sep;110:363-370. doi: 10.1016/j.ijid.2021.07.054. Epub 2021 Jul 25.
Int J Infect Dis. 2021.
PMID: 34320412
Free PMC article.
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Changes in the incidence of invasive disease due to Streptococcus pneumoniae, Haemophilus influenzae, and Neisseria meningitidis during the COVID-19 pandemic in 26 countries and territories in the Invasive Respiratory Infection Surveillance Initiative: a prospective analysis of surveillance data.
Brueggemann AB, Jansen van Rensburg MJ, Shaw D, McCarthy ND, Jolley KA, Maiden MCJ, van der Linden MPG, Amin-Chowdhury Z, Bennett DE, Borrow R, Brandileone MC, Broughton K, Campbell R, Cao B, Casanova C, Choi EH, Chu YW, Clark SA, Claus H, Coelho J, Corcoran M, Cottrell S, Cunney RJ, Dalby T, Davies H, de Gouveia L, Deghmane AE, Demczuk W, Desmet S, Drew RJ, du Plessis M, Erlendsdottir H, Fry NK, Fuursted K, Gray SJ, Henriques-Normark B, Hale T, Hilty M, Hoffmann S, Humphreys H, Ip M, Jacobsson S, Johnston J, Kozakova J, Kristinsson KG, Krizova P, Kuch A, Ladhani SN, Lâm TT, Lebedova V, Lindholm L, Litt DJ, Martin I, Martiny D, Mattheus W, McElligott M, Meehan M, Meiring S, Mölling P, Morfeldt E, Morgan J, Mulhall RM, Muñoz-Almagro C, Murdoch DR, Murphy J, Musilek M, Mzabi A, Perez-Argüello A, Perrin M, Perry M, Redin A, Roberts R, Roberts M, Rokney A, Ron M, Scott KJ, Sheppard CL, Siira L, Skoczyńska A, Sloan M, Slotved HC, Smith AJ, Song JY, Taha MK, Toropainen M, Tsang D, Vainio A, van Sorge NM, Varon E, Vlach J, Vogel U, Vohrnova S, von Gottberg A, Zanella RC, Zhou F.
Brueggemann AB, et al. Among authors: perez arguello a.
Lancet Digit Health. 2021 Jun;3(6):e360-e370. doi: 10.1016/S2589-7500(21)00077-7.
Lancet Digit Health. 2021.
PMID: 34045002
Free PMC article.
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Rapid identification, capsular typing and molecular characterization of Streptococcus pneumoniae by using whole genome nanopore sequencing.
Garcia-Garcia S, Perez-Arguello A, Henares D, Timoneda N, Muñoz-Almagro C.
Garcia-Garcia S, et al. Among authors: perez arguello a.
BMC Microbiol. 2020 Nov 13;20(1):347. doi: 10.1186/s12866-020-02032-x.
BMC Microbiol. 2020.
PMID: 33187472
Free PMC article.
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Nasopharyngeal bacterial load as a marker for rapid and easy diagnosis of invasive pneumococcal disease in children from Mozambique.
Brotons P, Bassat Q, Lanaspa M, Henares D, Perez-Arguello A, Madrid L, Balcells R, Acacio S, Andres-Franch M, Marcos MA, Valero-Rello A, Muñoz-Almagro C.
Brotons P, et al. Among authors: perez arguello a.
PLoS One. 2017 Sep 14;12(9):e0184762. doi: 10.1371/journal.pone.0184762. eCollection 2017.
PLoS One. 2017.
PMID: 28910402
Free PMC article.
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