Peng XL - Search Results

1

Truncated O-Glycan-Bearing MUC16 Enhances Pancreatic Cancer Cells Aggressiveness via α4β1 Integrin Complexes and FAK Signaling.

Rajesh C, Sagar S, Rathinavel AK, Chemparathy DT, Peng XL, Yeh JJ, Hollingsworth MA, Radhakrishnan P. Rajesh C, et al. Among authors: peng xl. Int J Mol Sci. 2022 May 13;23(10):5459. doi: 10.3390/ijms23105459. Int J Mol Sci. 2022. PMID: 35628269 Free PMC article.

2

De novo compartment deconvolution and weight estimation of tumor samples using DECODER.

Peng XL, Moffitt RA, Torphy RJ, Volmar KE, Yeh JJ. Peng XL, et al. Nat Commun. 2019 Oct 18;10(1):4729. doi: 10.1038/s41467-019-12517-7. Nat Commun. 2019. PMID: 31628300 Free PMC article.

3

Purity Independent Subtyping of Tumors (PurIST), A Clinically Robust, Single-sample Classifier for Tumor Subtyping in Pancreatic Cancer.

Rashid NU, Peng XL, Jin C, Moffitt RA, Volmar KE, Belt BA, Panni RZ, Nywening TM, Herrera SG, Moore KJ, Hennessey SG, Morrison AB, Kawalerski R, Nayyar A, Chang AE, Schmidt B, Kim HJ, Linehan DC, Yeh JJ. Rashid NU, et al. Among authors: peng xl. Clin Cancer Res. 2020 Jan 1;26(1):82-92. doi: 10.1158/1078-0432.CCR-19-1467. Epub 2019 Nov 21. Clin Cancer Res. 2020. PMID: 31754050 Free PMC article.

4

Irreversible JNK1-JUN inhibition by JNK-IN-8 sensitizes pancreatic cancer to 5-FU/FOLFOX chemotherapy.

Lipner MB, Peng XL, Jin C, Xu Y, Gao Y, East MP, Rashid NU, Moffitt RA, Herrera Loeza SG, Morrison AB, Golitz BT, Vaziri C, Graves LM, Johnson GL, Yeh JJ. Lipner MB, et al. Among authors: peng xl. JCI Insight. 2020 Apr 23;5(8):e129905. doi: 10.1172/jci.insight.129905. JCI Insight. 2020. PMID: 32213714 Free PMC article.

5

Isoforms of MUC16 activate oncogenic signaling through EGF receptors to enhance the progression of pancreatic cancer.

Thomas D, Sagar S, Liu X, Lee HR, Grunkemeyer JA, Grandgenett PM, Caffrey T, O'Connell KA, Swanson B, Marcos-Silva L, Steentoft C, Wandall HH, Maurer HC, Peng XL, Yeh JJ, Qiu F, Yu F, Madiyalakan R, Olive KP, Mandel U, Clausen H, Hollingsworth MA, Radhakrishnan P. Thomas D, et al. Among authors: peng xl. Mol Ther. 2021 Apr 7;29(4):1557-1571. doi: 10.1016/j.ymthe.2020.12.029. Epub 2020 Dec 25. Mol Ther. 2021. PMID: 33359791 Free PMC article.

6

Single-cell transcriptome analysis defines heterogeneity of the murine pancreatic ductal tree.

Hendley AM, Rao AA, Leonhardt L, Ashe S, Smith JA, Giacometti S, Peng XL, Jiang H, Berrios DI, Pawlak M, Li LY, Lee J, Collisson EA, Anderson MS, Fragiadakis GK, Yeh JJ, Ye CJ, Kim GE, Weaver VM, Hebrok M. Hendley AM, et al. Among authors: peng xl. Elife. 2021 May 19;10:e67776. doi: 10.7554/eLife.67776. Elife. 2021. PMID: 34009124 Free PMC article.

7

Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype model.

Torre-Healy LA, Kawalerski RR, Oh K, Chrastecka L, Peng XL, Aguirre AJ, Rashid NU, Yeh JJ, Moffitt RA. Torre-Healy LA, et al. Among authors: peng xl. Commun Biol. 2023 Feb 10;6(1):163. doi: 10.1038/s42003-023-04461-6. Commun Biol. 2023. PMID: 36765128 Free PMC article.

8

Sub-Cluster Identification through Semi-Supervised Optimization of Rare-Cell Silhouettes (SCISSORS) in single-cell RNA-sequencing.

Leary JR, Xu Y, Morrison AB, Jin C, Shen EC, Kuhlers PC, Su Y, Rashid NU, Yeh JJ, Peng XL. Leary JR, et al. Among authors: peng xl. Bioinformatics. 2023 Aug 1;39(8):btad449. doi: 10.1093/bioinformatics/btad449. Bioinformatics. 2023. PMID: 37498558 Free PMC article.

9

Myofibroblastic cancer-associated fibroblast subtype heterogeneity in pancreatic cancer.

Kearney JF, Trembath HE, Chan PS, Morrison AB, Xu Y, Luan CF, McCabe IC, Zarmer SA, Kim HJ, Peng XL, Yeh JJ. Kearney JF, et al. Among authors: peng xl. J Surg Oncol. 2024 Apr;129(5):860-868. doi: 10.1002/jso.27582. Epub 2024 Jan 17. J Surg Oncol. 2024. PMID: 38233984

10

Efficient computation of high-dimensional penalized generalized linear mixed models by latent factor modeling of the random effects.

Heiling HM, Rashid NU, Li Q, Peng XL, Yeh JJ, Ibrahim JG. Heiling HM, et al. Among authors: peng xl. Biometrics. 2024 Jan 29;80(1):ujae016. doi: 10.1093/biomtc/ujae016. Biometrics. 2024. PMID: 38497825

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