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Structural, Dynamical, and Entropic Differences between SARS-CoV and SARS-CoV-2 s2m Elements Using Molecular Dynamics Simulations.
ACS Phys Chem Au. 2022 Oct 4;3(1):30-43. doi: 10.1021/acsphyschemau.2c00032. eCollection 2023 Jan 25.
ACS Phys Chem Au. 2022.
PMID: 36711027
Free PMC article.
Highly conserved s2m element of SARS-CoV-2 dimerizes via a kissing complex and interacts with host miRNA-1307-3p.
Imperatore JA, Cunningham CL, Pellegrene KA, Brinson RG, Marino JP, Evanseck JD, Mihailescu MR.
Imperatore JA, et al. Among authors: pellegrene ka.
Nucleic Acids Res. 2022 Jan 25;50(2):1017-1032. doi: 10.1093/nar/gkab1226.
Nucleic Acids Res. 2022.
PMID: 34908151
Free PMC article.
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Uridylation of the histone mRNA stem-loop weakens binding interactions with SLBP while maintaining interactions with 3'hExo.
Shine M, Harris SE, Pellegrene KA, Kensinger AH, Mihailescu MR, Evanseck JD, Lackey PE.
Shine M, et al. Among authors: pellegrene ka.
RNA Biol. 2023 Jan;20(1):469-481. doi: 10.1080/15476286.2023.2171760.
RNA Biol. 2023.
PMID: 37516934
Free PMC article.
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A Role for Fragment-Based Drug Design in Developing Novel Lead Compounds for Central Nervous System Targets.
Wasko MJ, Pellegrene KA, Madura JD, Surratt CK.
Wasko MJ, et al. Among authors: pellegrene ka.
Front Neurol. 2015 Sep 11;6:197. doi: 10.3389/fneur.2015.00197. eCollection 2015.
Front Neurol. 2015.
PMID: 26441817
Free PMC article.
Review.
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