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Page 1
How genomics can help biodiversity conservation.
Theissinger K, Fernandes C, Formenti G, Bista I, Berg PR, Bleidorn C, Bombarely A, Crottini A, Gallo GR, Godoy JA, Jentoft S, Malukiewicz J, Mouton A, Oomen RA, Paez S, Palsbøll PJ, Pampoulie C, Ruiz-López MJ, Secomandi S, Svardal H, Theofanopoulou C, de Vries J, Waldvogel AM, Zhang G, Jarvis ED, Bálint M, Ciofi C, Waterhouse RM, Mazzoni CJ, Höglund J; European Reference Genome Atlas Consortium. Theissinger K, et al. Trends Genet. 2023 Jul;39(7):545-559. doi: 10.1016/j.tig.2023.01.005. Epub 2023 Feb 16. Trends Genet. 2023. PMID: 36801111 Free article. Review.
HaploTypo: a variant-calling pipeline for phased genomes.
Pegueroles C, Mixão V, Carreté L, Molina M, Gabaldón T. Pegueroles C, et al. Bioinformatics. 2020 Apr 15;36(8):2569-2571. doi: 10.1093/bioinformatics/btz933. Bioinformatics. 2020. PMID: 31834373 Free PMC article.
Genomic basis for early-life mortality in sharpsnout seabream.
Torrado H, Pegueroles C, Raventos N, Carreras C, Macpherson E, Pascual M. Torrado H, et al. Among authors: pegueroles c. Sci Rep. 2022 Oct 14;12(1):17265. doi: 10.1038/s41598-022-21597-3. Sci Rep. 2022. PMID: 36241649 Free PMC article.
Analysis of the P. lividus sea urchin genome highlights contrasting trends of genomic and regulatory evolution in deuterostomes.
Marlétaz F, Couloux A, Poulain J, Labadie K, Da Silva C, Mangenot S, Noel B, Poustka AJ, Dru P, Pegueroles C, Borra M, Lowe EK, Lhomond G, Besnardeau L, Le Gras S, Ye T, Gavriouchkina D, Russo R, Costa C, Zito F, Anello L, Nicosia A, Ragusa MA, Pascual M, Molina MD, Chessel A, Di Carlo M, Turon X, Copley RR, Exposito JY, Martinez P, Cavalieri V, Ben Tabou de Leon S, Croce J, Oliveri P, Matranga V, Di Bernardo M, Morales J, Cormier P, Geneviève AM, Aury JM, Barbe V, Wincker P, Arnone MI, Gache C, Lepage T. Marlétaz F, et al. Among authors: pegueroles c. Cell Genom. 2023 Apr 5;3(4):100295. doi: 10.1016/j.xgen.2023.100295. eCollection 2023 Apr 12. Cell Genom. 2023. PMID: 37082140 Free PMC article.
The era of reference genomes in conservation genomics.
Formenti G, Theissinger K, Fernandes C, Bista I, Bombarely A, Bleidorn C, Ciofi C, Crottini A, Godoy JA, Höglund J, Malukiewicz J, Mouton A, Oomen RA, Paez S, Palsbøll PJ, Pampoulie C, Ruiz-López MJ, Svardal H, Theofanopoulou C, de Vries J, Waldvogel AM, Zhang G, Mazzoni CJ, Jarvis ED, Bálint M; European Reference Genome Atlas (ERGA) Consortium. Formenti G, et al. Trends Ecol Evol. 2022 Mar;37(3):197-202. doi: 10.1016/j.tree.2021.11.008. Epub 2022 Jan 24. Trends Ecol Evol. 2022. PMID: 35086739 Free article.
26 results