Peddada SD - Search Results

1

Determination of Temporal Order among the Components of an Oscillatory System.

Barragán S, Rueda C, Fernández MA, Peddada SD. Barragán S, et al. Among authors: peddada sd. PLoS One. 2015 Jul 7;10(7):e0124842. doi: 10.1371/journal.pone.0124842. eCollection 2015. PLoS One. 2015. PMID: 26151635 Free PMC article.

2

Estimation of Parameters Subject to Order Restrictions on a Circle With Application to Estimation of Phase Angles of Cell Cycle Genes.

Rueda C, Fernández MA, Peddada SD. Rueda C, et al. Among authors: peddada sd. J Am Stat Assoc. 2009 Mar 1;104(485):338-347. doi: 10.1198/jasa.2009.0120. J Am Stat Assoc. 2009. PMID: 19750145 Free PMC article.

3

Dissecting the fission yeast regulatory network reveals phase-specific control elements of its cell cycle.

Bushel PR, Heard NA, Gutman R, Liu L, Peddada SD, Pyne S. Bushel PR, et al. Among authors: peddada sd. BMC Syst Biol. 2009 Sep 16;3:93. doi: 10.1186/1752-0509-3-93. BMC Syst Biol. 2009. PMID: 19758441 Free PMC article.

4

Identification of a core set of signature cell cycle genes whose relative order of time to peak expression is conserved across species.

Fernández MA, Rueda C, Peddada SD. Fernández MA, et al. Among authors: peddada sd. Nucleic Acids Res. 2012 Apr;40(7):2823-32. doi: 10.1093/nar/gkr1077. Epub 2011 Dec 1. Nucleic Acids Res. 2012. PMID: 22135306 Free PMC article.

5

isocir: An R Package for Constrained Inference using Isotonic Regression for Circular Data, with an Application to Cell Biology.

Barragán S, Fernández MA, Rueda C, Peddada SD. Barragán S, et al. Among authors: peddada sd. J Stat Softw. 2013 Aug;54(4):i04. doi: 10.18637/jss.v054.i04. J Stat Softw. 2013. PMID: 24976799 Free PMC article.

6

Circular piecewise regression with applications to cell-cycle data.

Rueda C, Fernández MA, Barragán S, Mardia KV, Peddada SD. Rueda C, et al. Among authors: peddada sd. Biometrics. 2016 Dec;72(4):1266-1274. doi: 10.1111/biom.12512. Epub 2016 Mar 17. Biometrics. 2016. PMID: 26991351 Free PMC article.

7

Order restricted inference for oscillatory systems for detecting rhythmic signals.

Larriba Y, Rueda C, Fernández MA, Peddada SD. Larriba Y, et al. Among authors: peddada sd. Nucleic Acids Res. 2016 Dec 15;44(22):e163. doi: 10.1093/nar/gkw771. Epub 2016 Sep 4. Nucleic Acids Res. 2016. PMID: 27596593 Free PMC article.

8

A Bootstrap Based Measure Robust to the Choice of Normalization Methods for Detecting Rhythmic Features in High Dimensional Data.

Larriba Y, Rueda C, Fernández MA, Peddada SD. Larriba Y, et al. Among authors: peddada sd. Front Genet. 2018 Feb 2;9:24. doi: 10.3389/fgene.2018.00024. eCollection 2018. Front Genet. 2018. PMID: 29456555 Free PMC article.

9

Microarray Data Normalization and Robust Detection of Rhythmic Features.

Larriba Y, Rueda C, Fernández MA, Peddada SD. Larriba Y, et al. Among authors: peddada sd. Methods Mol Biol. 2019;1986:207-225. doi: 10.1007/978-1-4939-9442-7_9. Methods Mol Biol. 2019. PMID: 31115890

10

Order restricted inference in chronobiology.

Larriba Y, Rueda C, Fernández MA, Peddada SD. Larriba Y, et al. Among authors: peddada sd. Stat Med. 2020 Feb 10;39(3):265-278. doi: 10.1002/sim.8397. Epub 2019 Nov 25. Stat Med. 2020. PMID: 31769057

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