Pavlopoulos GA - Search Results

1

Bipartite graphs in systems biology and medicine: a survey of methods and applications.

Pavlopoulos GA, Kontou PI, Pavlopoulou A, Bouyioukos C, Markou E, Bagos PG. Pavlopoulos GA, et al. Gigascience. 2018 Apr 1;7(4):1-31. doi: 10.1093/gigascience/giy014. Gigascience. 2018. PMID: 29648623 Free PMC article. Review.

2

GPCRs, G-proteins, effectors and their interactions: human-gpDB, a database employing visualization tools and data integration techniques.

Satagopam VP, Theodoropoulou MC, Stampolakis CK, Pavlopoulos GA, Papandreou NC, Bagos PG, Schneider R, Hamodrakas SJ. Satagopam VP, et al. Among authors: pavlopoulos ga. Database (Oxford). 2010 Aug 5;2010:baq019. doi: 10.1093/database/baq019. Database (Oxford). 2010. PMID: 20689020 Free PMC article.

3

Using graph theory to analyze biological networks.

Pavlopoulos GA, Secrier M, Moschopoulos CN, Soldatos TG, Kossida S, Aerts J, Schneider R, Bagos PG. Pavlopoulos GA, et al. BioData Min. 2011 Apr 28;4:10. doi: 10.1186/1756-0381-4-10. BioData Min. 2011. PMID: 21527005 Free PMC article.

4

Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future.

Pavlopoulos GA, Malliarakis D, Papanikolaou N, Theodosiou T, Enright AJ, Iliopoulos I. Pavlopoulos GA, et al. Gigascience. 2015 Aug 25;4:38. doi: 10.1186/s13742-015-0077-2. eCollection 2015. Gigascience. 2015. PMID: 26309733 Free PMC article. Review.

5

Network analysis of genes and their association with diseases.

Kontou PI, Pavlopoulou A, Dimou NL, Pavlopoulos GA, Bagos PG. Kontou PI, et al. Among authors: pavlopoulos ga. Gene. 2016 Sep 15;590(1):68-78. doi: 10.1016/j.gene.2016.05.044. Epub 2016 Jun 2. Gene. 2016. PMID: 27265032

6

Data and programs in support of network analysis of genes and their association with diseases.

Kontou PI, Pavlopoulou A, Dimou NL, Pavlopoulos GA, Bagos PG. Kontou PI, et al. Among authors: pavlopoulos ga. Data Brief. 2016 Jul 19;8:1036-9. doi: 10.1016/j.dib.2016.07.022. eCollection 2016 Sep. Data Brief. 2016. PMID: 27508260 Free PMC article.

7

NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks.

Theodosiou T, Efstathiou G, Papanikolaou N, Kyrpides NC, Bagos PG, Iliopoulos I, Pavlopoulos GA. Theodosiou T, et al. Among authors: pavlopoulos ga. BMC Res Notes. 2017 Jul 14;10(1):278. doi: 10.1186/s13104-017-2607-8. BMC Res Notes. 2017. PMID: 28705239 Free PMC article.

8

VICTOR: A visual analytics web application for comparing cluster sets.

Karatzas E, Gkonta M, Hotova J, Baltoumas FA, Kontou PI, Bobotsis CJ, Bagos PG, Pavlopoulos GA. Karatzas E, et al. Among authors: pavlopoulos ga. Comput Biol Med. 2021 Aug;135:104557. doi: 10.1016/j.compbiomed.2021.104557. Epub 2021 Jun 8. Comput Biol Med. 2021. PMID: 34139436

9

Drug genetic associations with COVID-19 manifestations: a data mining and network biology approach.

Charitou T, Kontou PI, Tamposis IA, Pavlopoulos GA, Braliou GG, Bagos PG. Charitou T, et al. Among authors: pavlopoulos ga. Pharmacogenomics J. 2022 Dec;22(5-6):294-302. doi: 10.1038/s41397-022-00289-1. Epub 2022 Sep 28. Pharmacogenomics J. 2022. PMID: 36171417 Free PMC article.

10

The network makeup artist (NORMA-2.0): distinguishing annotated groups in a network using innovative layout strategies.

Karatzas E, Koutrouli M, Baltoumas FA, Papanikolopoulou K, Bouyioukos C, Pavlopoulos GA. Karatzas E, et al. Among authors: pavlopoulos ga. Bioinform Adv. 2022 May 13;2(1):vbac036. doi: 10.1093/bioadv/vbac036. eCollection 2022. Bioinform Adv. 2022. PMID: 36699373 Free PMC article.

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