Pasznik P - Search Results

1

Allosteric Modulation of the CB1 Cannabinoid Receptor by Cannabidiol-A Molecular Modeling Study of the N-Terminal Domain and the Allosteric-Orthosteric Coupling.

Jakowiecki J, Abel R, Orzeł U, Pasznik P, Preissner R, Filipek S. Jakowiecki J, et al. Among authors: pasznik p. Molecules. 2021 Apr 23;26(9):2456. doi: 10.3390/molecules26092456. Molecules. 2021. PMID: 33922473 Free PMC article.

2

GPCRM: a homology modeling web service with triple membrane-fitted quality assessment of GPCR models.

Miszta P, Pasznik P, Jakowiecki J, Sztyler A, Latek D, Filipek S. Miszta P, et al. Among authors: pasznik p. Nucleic Acids Res. 2018 Jul 2;46(W1):W387-W395. doi: 10.1093/nar/gky429. Nucleic Acids Res. 2018. PMID: 29788177 Free PMC article.

3

GPCRsignal: webserver for analysis of the interface between G-protein-coupled receptors and their effector proteins by dynamics and mutations.

Miszta P, Pasznik P, Niewieczerzał S, Jakowiecki J, Filipek S. Miszta P, et al. Among authors: pasznik p. Nucleic Acids Res. 2021 Jul 2;49(W1):W247-W256. doi: 10.1093/nar/gkab434. Nucleic Acids Res. 2021. PMID: 34060630 Free PMC article.

4

Homology Modeling Using GPCRM Web Service.

Miszta P, Niewieczerzał S, Pasznik P, Filipek S. Miszta P, et al. Among authors: pasznik p. Methods Mol Biol. 2021;2268:305-321. doi: 10.1007/978-1-0716-1221-7_20. Methods Mol Biol. 2021. PMID: 34085277

5

COGRIMEN: Coarse-Grained Method for Modeling of Membrane Proteins in Implicit Environments.

Miszta P, Pasznik P, Niewieczerzał S, Młynarczyk K, Filipek S. Miszta P, et al. Among authors: pasznik p. J Chem Theory Comput. 2022 Sep 13;18(9):5145-5156. doi: 10.1021/acs.jctc.2c00140. Epub 2022 Aug 23. J Chem Theory Comput. 2022. PMID: 35998323 Free PMC article.

6

Towards improved quality of GPCR models by usage of multiple templates and profile-profile comparison.

Latek D, Pasznik P, Carlomagno T, Filipek S. Latek D, et al. Among authors: pasznik p. PLoS One. 2013;8(2):e56742. doi: 10.1371/journal.pone.0056742. Epub 2013 Feb 28. PLoS One. 2013. PMID: 23468878 Free PMC article.

7

Potential off-target effects of beta-blockers on gut hormone receptors: In silico study including GUT-DOCK-A web service for small-molecule docking.

Pasznik P, Rutkowska E, Niewieczerzal S, Cielecka-Piontek J, Latek D. Pasznik P, et al. PLoS One. 2019 Jan 25;14(1):e0210705. doi: 10.1371/journal.pone.0210705. eCollection 2019. PLoS One. 2019. PMID: 30682072 Free PMC article.

8

LassoProt: server to analyze biopolymers with lassos.

Dabrowski-Tumanski P, Niemyska W, Pasznik P, Sulkowska JI. Dabrowski-Tumanski P, et al. Among authors: pasznik p. Nucleic Acids Res. 2016 Jul 8;44(W1):W383-9. doi: 10.1093/nar/gkw308. Epub 2016 Apr 29. Nucleic Acids Res. 2016. PMID: 27131383 Free PMC article.

9

GS-SMD server for steered molecular dynamics of peptide substrates in the active site of the γ-secretase complex.

Orzeł U, Pasznik P, Miszta P, Lorkowski M, Niewieczerzał S, Jakowiecki J, Filipek S. Orzeł U, et al. Among authors: pasznik p. Nucleic Acids Res. 2023 Jul 5;51(W1):W251-W262. doi: 10.1093/nar/gkad409. Nucleic Acids Res. 2023. PMID: 37207343 Free PMC article.

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