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FUNGI: FUsioN Gene Integration toolset.
Bioinformatics. 2021 Oct 11;37(19):3353-3355. doi: 10.1093/bioinformatics/btab206.
Bioinformatics. 2021.
PMID: 33772596
Free PMC article.
TissUUmaps: interactive visualization of large-scale spatial gene expression and tissue morphology data.
Solorzano L, Partel G, Wählby C.
Solorzano L, et al. Among authors: partel g.
Bioinformatics. 2020 Aug 1;36(15):4363-4365. doi: 10.1093/bioinformatics/btaa541.
Bioinformatics. 2020.
PMID: 32449759
Free PMC article.
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Spage2vec: Unsupervised representation of localized spatial gene expression signatures.
Partel G, Wählby C.
Partel G, et al.
FEBS J. 2021 Mar;288(6):1859-1870. doi: 10.1111/febs.15572. Epub 2020 Oct 11.
FEBS J. 2021.
PMID: 32976679
Free PMC article.
Item in Clipboard
Automated identification of the mouse brain's spatial compartments from in situ sequencing data.
Partel G, Hilscher MM, Milli G, Solorzano L, Klemm AH, Nilsson M, Wählby C.
Partel G, et al.
BMC Biol. 2020 Oct 19;18(1):144. doi: 10.1186/s12915-020-00874-5.
BMC Biol. 2020.
PMID: 33076915
Free PMC article.
Item in Clipboard
Deep Learning in Image Cytometry: A Review.
Gupta A, Harrison PJ, Wieslander H, Pielawski N, Kartasalo K, Partel G, Solorzano L, Suveer A, Klemm AH, Spjuth O, Sintorn IM, Wählby C.
Gupta A, et al. Among authors: partel g.
Cytometry A. 2019 Apr;95(4):366-380. doi: 10.1002/cyto.a.23701. Epub 2018 Dec 19.
Cytometry A. 2019.
PMID: 30565841
Free PMC article.
Review.
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De novo spatiotemporal modelling of cell-type signatures in the developmental human heart using graph convolutional neural networks.
Marco Salas S, Yuan X, Sylven C, Nilsson M, Wählby C, Partel G.
Marco Salas S, et al. Among authors: partel g.
PLoS Comput Biol. 2022 Aug 12;18(8):e1010366. doi: 10.1371/journal.pcbi.1010366. eCollection 2022 Aug.
PLoS Comput Biol. 2022.
PMID: 35960757
Free PMC article.
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