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Systematic Collaborative Reanalysis of Genomic Data Improves Diagnostic Yield in Neurologic Rare Diseases.
Bullich G, Matalonga L, Pujadas M, Papakonstantinou A, Piscia D, Tonda R, Artuch R, Gallano P, Garrabou G, González JR, Grinberg D, Guitart M, Laurie S, Lázaro C, Luengo C, Martí R, Milà M, Ovelleiro D, Parra G, Pujol A, Tizzano E, Macaya A, Palau F, Ribes A, Pérez-Jurado LA, Beltran S; Undiagnosed Rare Disease Program of Catalonia (URD-Cat) Consortium. Bullich G, et al. Among authors: parra g. J Mol Diagn. 2022 May;24(5):529-542. doi: 10.1016/j.jmoldx.2022.02.003. J Mol Diagn. 2022. PMID: 35569879 Free article.
Phenomic and Genomic Characterization of a Mutant Platform in Cucurbita pepo.
García A, Aguado E, Parra G, Manzano S, Martínez C, Megías Z, Cebrián G, Romero J, Beltrán S, Garrido D, Jamilena M. García A, et al. Among authors: parra g. Front Plant Sci. 2018 Aug 3;9:1049. doi: 10.3389/fpls.2018.01049. eCollection 2018. Front Plant Sci. 2018. PMID: 30123227 Free PMC article.
Using geneid to Identify Genes.
Alioto T, Blanco E, Parra G, Guigó R. Alioto T, et al. Among authors: parra g. Curr Protoc Bioinformatics. 2018 Dec;64(1):e56. doi: 10.1002/cpbi.56. Epub 2018 Oct 17. Curr Protoc Bioinformatics. 2018. PMID: 30332532
Integrated Analysis of Germline and Tumor DNA Identifies New Candidate Genes Involved in Familial Colorectal Cancer.
Díaz-Gay M, Franch-Expósito S, Arnau-Collell C, Park S, Supek F, Muñoz J, Bonjoch L, Gratacós-Mulleras A, Sánchez-Rojas PA, Esteban-Jurado C, Ocaña T, Cuatrecasas M, Vila-Casadesús M, Lozano JJ, Parra G, Laurie S, Beltran S; EPICOLON Consortium; Castells A, Bujanda L, Cubiella J, Balaguer F, Castellví-Bel S. Díaz-Gay M, et al. Among authors: parra g. Cancers (Basel). 2019 Mar 13;11(3):362. doi: 10.3390/cancers11030362. Cancers (Basel). 2019. PMID: 30871259 Free PMC article.
PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions.
Olson ND, Wagner J, McDaniel J, Stephens SH, Westreich ST, Prasanna AG, Johanson E, Boja E, Maier EJ, Serang O, Jáspez D, Lorenzo-Salazar JM, Muñoz-Barrera A, Rubio-Rodríguez LA, Flores C, Kyriakidis K, Malousi A, Shafin K, Pesout T, Jain M, Paten B, Chang PC, Kolesnikov A, Nattestad M, Baid G, Goel S, Yang H, Carroll A, Eveleigh R, Bourgey M, Bourque G, Li G, Ma C, Tang L, Du Y, Zhang S, Morata J, Tonda R, Parra G, Trotta JR, Brueffer C, Demirkaya-Budak S, Kabakci-Zorlu D, Turgut D, Kalay Ö, Budak G, Narcı K, Arslan E, Brown R, Johnson IJ, Dolgoborodov A, Semenyuk V, Jain A, Tetikol HS, Jain V, Ruehle M, Lajoie B, Roddey C, Catreux S, Mehio R, Ahsan MU, Liu Q, Wang K, Sahraeian SME, Fang LT, Mohiyuddin M, Hung C, Jain C, Feng H, Li Z, Chen L, Sedlazeck FJ, Zook JM. Olson ND, et al. Among authors: parra g. Cell Genom. 2022 May 11;2(5):100129. doi: 10.1016/j.xgen.2022.100129. Epub 2022 Apr 27. Cell Genom. 2022. PMID: 35720974 Free PMC article.
GeneID in Drosophila.
Parra G, Blanco E, Guigó R. Parra G, et al. Genome Res. 2000 Apr;10(4):511-5. doi: 10.1101/gr.10.4.511. Genome Res. 2000. PMID: 10779490 Free PMC article.
Using geneid to identify genes.
Blanco E, Parra G, Guigó R. Blanco E, et al. Among authors: parra g. Curr Protoc Bioinformatics. 2007 Jun;Chapter 4:Unit 4.3. doi: 10.1002/0471250953.bi0403s18. Curr Protoc Bioinformatics. 2007. PMID: 18428791
Comparative gene prediction in human and mouse.
Parra G, Agarwal P, Abril JF, Wiehe T, Fickett JW, Guigó R. Parra G, et al. Genome Res. 2003 Jan;13(1):108-17. doi: 10.1101/gr.871403. Genome Res. 2003. PMID: 12529313 Free PMC article.
368 results