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Page 1
Next Generation Sequencing in Newborn Screening in the United Kingdom National Health Service.
van Campen JC, Sollars ESA, Thomas RC, Bartlett CM, Milano A, Parker MD, Dawe J, Winship PR, Peck G, Grafham D, Kirk RJ, Bonham JR, Goodeve AC, Dalton A. van Campen JC, et al. Among authors: parker md. Int J Neonatal Screen. 2019 Dec;5(4):40. doi: 10.3390/ijns5040040. Epub 2019 Nov 5. Int J Neonatal Screen. 2019. PMID: 31844782 Free PMC article.
Value of systematic genetic screening of patients with amyotrophic lateral sclerosis.
Shepheard SR, Parker MD, Cooper-Knock J, Verber NS, Tuddenham L, Heath P, Beauchamp N, Place E, Sollars ESA, Turner MR, Malaspina A, Fratta P, Hewamadduma C, Jenkins TM, McDermott CJ, Wang D, Kirby J, Shaw PJ; Project MINE Consortium; Project MinE. Shepheard SR, et al. Among authors: parker md. J Neurol Neurosurg Psychiatry. 2021 May;92(5):510-518. doi: 10.1136/jnnp-2020-325014. Epub 2021 Feb 14. J Neurol Neurosurg Psychiatry. 2021. PMID: 33589474 Free PMC article.
Diagnosis of SARS-CoV-2 Infection with LamPORE, a High-Throughput Platform Combining Loop-Mediated Isothermal Amplification and Nanopore Sequencing.
Peto L, Rodger G, Carter DP, Osman KL, Yavuz M, Johnson K, Raza M, Parker MD, Wyles MD, Andersson M, Justice A, Vaughan A, Hoosdally S, Stoesser N, Matthews PC, Eyre DW, Peto TEA, Carroll MW, de Silva TI, Crook DW, Evans CM, Pullan ST. Peto L, et al. Among authors: parker md. J Clin Microbiol. 2021 May 19;59(6):e03271-20. doi: 10.1128/JCM.03271-20. Print 2021 May 19. J Clin Microbiol. 2021. PMID: 33782112 Free PMC article.
Protocol for the COG-UK hospital-onset COVID-19 infection (HOCI) multicentre interventional clinical study: evaluating the efficacy of rapid genome sequencing of SARS-CoV-2 in limiting the spread of COVID-19 in UK NHS hospitals.
Blackstone J, Stirrup O, Mapp F, Panca M, Copas A, Flowers P, Hockey L, Price J, Partridge D, Peters C, de Silva T, Nebbia G, Snell LB, McComish R; COVID-19 Genomics UK (COG-UK) Consortium; Breuer J. Blackstone J, et al. BMJ Open. 2022 Apr 19;12(4):e052514. doi: 10.1136/bmjopen-2021-052514. BMJ Open. 2022. PMID: 35440446 Free PMC article.
Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study.
Stirrup O, Blackstone J, Mapp F, MacNeil A, Panca M, Holmes A, Machin N, Shin GY, Mahungu T, Saeed K, Saluja T, Taha Y, Mahida N, Pope C, Chawla A, Cutino-Moguel MT, Tamuri A, Williams R, Darby A, Robertson DL, Flaviani F, Nastouli E, Robson S, Smith D, Loose M, Laing K, Monahan I, Kele B, Haldenby S, George R, Bashton M, Witney AA, Byott M, Coll F, Chapman M, Peacock SJ; COG-UK HOCI Investigators; COVID-19 Genomics UK (COG-UK) consortium; Hughes J, Nebbia G, Partridge DG, Parker M, Price JR, Peters C, Roy S, Snell LB, de Silva TI, Thomson E, Flowers P, Copas A, Breuer J. Stirrup O, et al. Elife. 2022 Sep 13;11:e78427. doi: 10.7554/eLife.78427. Elife. 2022. PMID: 36098502 Free PMC article.
Factors affecting turnaround time of SARS-CoV-2 sequencing for inpatient infection prevention and control decision making: analysis of data from the COG-UK HOCI study.
Colton H, Parker MD, Stirrup O, Blackstone J, Loose M, McClure CP, Roy S, Williams C, McLeod J, Smith D, Taha Y, Zhang P, Hsu SN, Kele B, Harris K, Mapp F, Williams R; COG-UK HOCI Investigators, COVID-19 Genomics UK (COG-UK) Consortium; Flowers P, Breuer J, Partridge DG, de Silva TI. Colton H, et al. Among authors: parker md. J Hosp Infect. 2023 Jan;131:34-42. doi: 10.1016/j.jhin.2022.09.022. Epub 2022 Oct 10. J Hosp Infect. 2023. PMID: 36228768 Free PMC article.
Altered subgenomic RNA abundance provides unique insight into SARS-CoV-2 B.1.1.7/Alpha variant infections.
Parker MD, Stewart H, Shehata OM, Lindsey BB, Shah DR, Hsu S, Keeley AJ, Partridge DG, Leary S, Cope A, State A, Johnson K, Ali N, Raghei R, Heffer J, Smith N, Zhang P, Gallis M, Louka SF, Hornsby HR, Alamri H, Whiteley M, Foulkes BH, Christou S, Wolverson P, Pohare M, Hansford SE, Green LR, Evans C, Raza M, Wang D, Firth AE, Edgar JR, Gaudieri S, Mallal S; COVID-19 Genomics UK (COG-UK) consortium; Collins MO, Peden AA, de Silva TI. Parker MD, et al. Commun Biol. 2022 Jul 5;5(1):666. doi: 10.1038/s42003-022-03565-9. Commun Biol. 2022. PMID: 35790808 Free PMC article.
Generation of a Novel SARS-CoV-2 Sub-genomic RNA Due to the R203K/G204R Variant in Nucleocapsid: Homologous Recombination has Potential to Change SARS-CoV-2 at Both Protein and RNA Level.
Leary S, Gaudieri S, Parker MD, Chopra A, James I, Pakala S, Alves E, John M, Lindsey BB, Keeley AJ, Rowland-Jones SL, Swanson MS, Ostrov DA, Bubenik JL, Das SR, Sidney J, Sette A; COVID-19 Genomics UK (COG-UK) consortium; de Silva TI, Phillips E, Mallal S. Leary S, et al. Among authors: parker md. Pathog Immun. 2021 Aug 20;6(2):27-49. doi: 10.20411/pai.v6i2.460. eCollection 2021. Pathog Immun. 2021. PMID: 34541432 Free PMC article.
Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data.
Parker MD, Lindsey BB, Leary S, Gaudieri S, Chopra A, Wyles M, Angyal A, Green LR, Parsons P, Tucker RM, Brown R, Groves D, Johnson K, Carrilero L, Heffer J, Partridge DG, Evans C, Raza M, Keeley AJ, Smith N, Filipe ADS, Shepherd JG, Davis C, Bennett S, Sreenu VB, Kohl A, Aranday-Cortes E, Tong L, Nichols J, Thomson EC; COVID-19 Genomics UK (COG-UK) Consortium; Wang D, Mallal S, de Silva TI. Parker MD, et al. Genome Res. 2021 Apr;31(4):645-658. doi: 10.1101/gr.268110.120. Epub 2021 Mar 15. Genome Res. 2021. PMID: 33722935 Free PMC article.
194 results