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Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins.
Van Nostrand EL, Pratt GA, Yee BA, Wheeler EC, Blue SM, Mueller J, Park SS, Garcia KE, Gelboin-Burkhart C, Nguyen TB, Rabano I, Stanton R, Sundararaman B, Wang R, Fu XD, Graveley BR, Yeo GW. Van Nostrand EL, et al. Among authors: park ss. Genome Biol. 2020 Apr 6;21(1):90. doi: 10.1186/s13059-020-01982-9. Genome Biol. 2020. PMID: 32252787 Free PMC article.
Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression.
Okholm TLH, Sathe S, Park SS, Kamstrup AB, Rasmussen AM, Shankar A, Chua ZM, Fristrup N, Nielsen MM, Vang S, Dyrskjøt L, Aigner S, Damgaard CK, Yeo GW, Pedersen JS. Okholm TLH, et al. Among authors: park ss. Genome Med. 2020 Dec 7;12(1):112. doi: 10.1186/s13073-020-00812-8. Genome Med. 2020. PMID: 33287884 Free PMC article.
Discovery and functional interrogation of SARS-CoV-2 protein-RNA interactions.
Xiang JS, Mueller JR, Luo EC, Yee BA, Schafer D, Schmok JC, Tan FE, Rothamel K, McVicar RN, Kwong EM, Jones KL, Her HL, Chen CY, Vu AQ, Jin W, Park SS, Le P, Brannan KW, Kofman ER, Li Y, Tankka AT, Dong KD, Song Y, Carlin AF, Van Nostrand EL, Leibel SL, Yeo GW. Xiang JS, et al. Among authors: park ss. bioRxiv [Preprint]. 2022 Feb 23:2022.02.21.481223. doi: 10.1101/2022.02.21.481223. bioRxiv. 2022. PMID: 35233578 Free PMC article. Preprint.
Discovery and functional interrogation of SARS-CoV-2 protein-RNA interactions.
Xiang JS, Mueller JR, Luo EC, Yee BA, Schafer D, Schmok JC, Tan FE, Rothamel K, McVicar RN, Kwong EM, Croker BA, Jones KL, Her HL, Chen CY, Vu AQ, Jin W, Park SS, Le P, Brannan KW, Kofman ER, Li Y, Tankka AT, Dong KD, Song Y, Clark AE, Carlin AF, Van Nostrand EL, Leibel SL, Yeo GW. Xiang JS, et al. Among authors: park ss. Res Sq [Preprint]. 2022 Mar 17:rs.3.rs-1394331. doi: 10.21203/rs.3.rs-1394331/v1. Res Sq. 2022. PMID: 35313591 Free PMC article. Preprint.
circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA.
Okholm TLH, Kamstrup AB, Nielsen MM, Hollensen AK, Graversgaard ML, Sørensen MH, Kristensen LS, Vang S, Park SS, Yeo GW, Dyrskjøt L, Kjems J, Pedersen JS, Damgaard CK. Okholm TLH, et al. Among authors: park ss. bioRxiv [Preprint]. 2024 Mar 26:2023.09.14.557527. doi: 10.1101/2023.09.14.557527. bioRxiv. 2024. PMID: 37745562 Free PMC article. Preprint.
Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies.
Medina-Munoz HC, Kofman E, Jagannatha P, Boyle EA, Yu T, Jones KL, Mueller JR, Lykins GD, Doudna AT, Park SS, Blue SM, Ranzau BL, Kohli RM, Komor AC, Yeo GW. Medina-Munoz HC, et al. Among authors: park ss. bioRxiv [Preprint]. 2023 Sep 25:2023.09.25.558915. doi: 10.1101/2023.09.25.558915. bioRxiv. 2023. PMID: 37808757 Free PMC article. Updated. Preprint.
Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies.
Medina-Munoz HC, Kofman E, Jagannatha P, Boyle EA, Yu T, Jones KL, Mueller JR, Lykins GD, Doudna AT, Park SS, Blue SM, Ranzau BL, Kohli RM, Komor AC, Yeo GW. Medina-Munoz HC, et al. Among authors: park ss. Nat Commun. 2024 Jan 29;15(1):875. doi: 10.1038/s41467-024-45009-4. Nat Commun. 2024. PMID: 38287010 Free PMC article.
2,061 results