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Analysis of 6.4 million SARS-CoV-2 genomes identifies mutations associated with fitness.
Obermeyer F, Jankowiak M, Barkas N, Schaffner SF, Pyle JD, Yurkovetskiy L, Bosso M, Park DJ, Babadi M, MacInnis BL, Luban J, Sabeti PC, Lemieux JE. Obermeyer F, et al. Among authors: park dj. medRxiv [Preprint]. 2022 Feb 16:2021.09.07.21263228. doi: 10.1101/2021.09.07.21263228. medRxiv. 2022. PMID: 35194619 Free PMC article. Updated. Preprint.
Identification and functional validation of the novel antimalarial resistance locus PF10_0355 in Plasmodium falciparum.
Van Tyne D, Park DJ, Schaffner SF, Neafsey DE, Angelino E, Cortese JF, Barnes KG, Rosen DM, Lukens AK, Daniels RF, Milner DA Jr, Johnson CA, Shlyakhter I, Grossman SR, Becker JS, Yamins D, Karlsson EK, Ndiaye D, Sarr O, Mboup S, Happi C, Furlotte NA, Eskin E, Kang HM, Hartl DL, Birren BW, Wiegand RC, Lander ES, Wirth DF, Volkman SK, Sabeti PC. Van Tyne D, et al. Among authors: park dj. PLoS Genet. 2011 Apr;7(4):e1001383. doi: 10.1371/journal.pgen.1001383. Epub 2011 Apr 21. PLoS Genet. 2011. PMID: 21533027 Free PMC article.
Application of genomics to field investigations of malaria by the international centers of excellence for malaria research.
Volkman SK, Ndiaye D, Diakite M, Koita OA, Nwakanma D, Daniels RF, Park DJ, Neafsey DE, Muskavitch MA, Krogstad DJ, Sabeti PC, Hartl DL, Wirth DF. Volkman SK, et al. Among authors: park dj. Acta Trop. 2012 Mar;121(3):324-32. doi: 10.1016/j.actatropica.2011.12.002. Epub 2011 Dec 13. Acta Trop. 2012. PMID: 22182668 Free PMC article. Review.
Human cerebral malaria and Plasmodium falciparum genotypes in Malawi.
Milner DA Jr, Vareta J, Valim C, Montgomery J, Daniels RF, Volkman SK, Neafsey DE, Park DJ, Schaffner SF, Mahesh NC, Barnes KG, Rosen DM, Lukens AK, Van Tyne D, Wiegand RC, Sabeti PC, Seydel KB, Glover SJ, Kamiza S, Molyneux ME, Taylor TE, Wirth DF. Milner DA Jr, et al. Among authors: park dj. Malar J. 2012 Feb 7;11:35. doi: 10.1186/1475-2875-11-35. Malar J. 2012. PMID: 22314206 Free PMC article.
Sequence-based association and selection scans identify drug resistance loci in the Plasmodium falciparum malaria parasite.
Park DJ, Lukens AK, Neafsey DE, Schaffner SF, Chang HH, Valim C, Ribacke U, Van Tyne D, Galinsky K, Galligan M, Becker JS, Ndiaye D, Mboup S, Wiegand RC, Hartl DL, Sabeti PC, Wirth DF, Volkman SK. Park DJ, et al. Proc Natl Acad Sci U S A. 2012 Aug 7;109(32):13052-7. doi: 10.1073/pnas.1210585109. Epub 2012 Jul 23. Proc Natl Acad Sci U S A. 2012. PMID: 22826220 Free PMC article.
Identifying recent adaptations in large-scale genomic data.
Grossman SR, Andersen KG, Shlyakhter I, Tabrizi S, Winnicki S, Yen A, Park DJ, Griesemer D, Karlsson EK, Wong SH, Cabili M, Adegbola RA, Bamezai RN, Hill AV, Vannberg FO, Rinn JL; 1000 Genomes Project; Lander ES, Schaffner SF, Sabeti PC. Grossman SR, et al. Among authors: park dj. Cell. 2013 Feb 14;152(4):703-13. doi: 10.1016/j.cell.2013.01.035. Cell. 2013. PMID: 23415221 Free PMC article.
Malaria life cycle intensifies both natural selection and random genetic drift.
Chang HH, Moss EL, Park DJ, Ndiaye D, Mboup S, Volkman SK, Sabeti PC, Wirth DF, Neafsey DE, Hartl DL. Chang HH, et al. Among authors: park dj. Proc Natl Acad Sci U S A. 2013 Dec 10;110(50):20129-34. doi: 10.1073/pnas.1319857110. Epub 2013 Nov 20. Proc Natl Acad Sci U S A. 2013. PMID: 24259712 Free PMC article.
1,262 results