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Profiling cellular diversity in sponges informs animal cell type and nervous system evolution.
Musser JM, Schippers KJ, Nickel M, Mizzon G, Kohn AB, Pape C, Ronchi P, Papadopoulos N, Tarashansky AJ, Hammel JU, Wolf F, Liang C, Hernández-Plaza A, Cantalapiedra CP, Achim K, Schieber NL, Pan L, Ruperti F, Francis WR, Vargas S, Kling S, Renkert M, Polikarpov M, Bourenkov G, Feuda R, Gaspar I, Burkhardt P, Wang B, Bork P, Beck M, Schneider TR, Kreshuk A, Wörheide G, Huerta-Cepas J, Schwab Y, Moroz LL, Arendt D. Musser JM, et al. Among authors: pape c. Science. 2021 Nov 5;374(6568):717-723. doi: 10.1126/science.abj2949. Epub 2021 Nov 4. Science. 2021. PMID: 34735222 Free PMC article.
Integrative Imaging Reveals SARS-CoV-2-Induced Reshaping of Subcellular Morphologies.
Cortese M, Lee JY, Cerikan B, Neufeldt CJ, Oorschot VMJ, Köhrer S, Hennies J, Schieber NL, Ronchi P, Mizzon G, Romero-Brey I, Santarella-Mellwig R, Schorb M, Boermel M, Mocaer K, Beckwith MS, Templin RM, Gross V, Pape C, Tischer C, Frankish J, Horvat NK, Laketa V, Stanifer M, Boulant S, Ruggieri A, Chatel-Chaix L, Schwab Y, Bartenschlager R. Cortese M, et al. Among authors: pape c. Cell Host Microbe. 2020 Dec 9;28(6):853-866.e5. doi: 10.1016/j.chom.2020.11.003. Epub 2020 Nov 17. Cell Host Microbe. 2020. PMID: 33245857 Free PMC article.
Whole-body integration of gene expression and single-cell morphology.
Vergara HM, Pape C, Meechan KI, Zinchenko V, Genoud C, Wanner AA, Mutemi KN, Titze B, Templin RM, Bertucci PY, Simakov O, Dürichen W, Machado P, Savage EL, Schermelleh L, Schwab Y, Friedrich RW, Kreshuk A, Tischer C, Arendt D. Vergara HM, et al. Among authors: pape c. Cell. 2021 Sep 2;184(18):4819-4837.e22. doi: 10.1016/j.cell.2021.07.017. Epub 2021 Aug 10. Cell. 2021. PMID: 34380046 Free PMC article.
Convolutional networks for supervised mining of molecular patterns within cellular context.
de Teresa-Trueba I, Goetz SK, Mattausch A, Stojanovska F, Zimmerli CE, Toro-Nahuelpan M, Cheng DWC, Tollervey F, Pape C, Beck M, Diz-Muñoz A, Kreshuk A, Mahamid J, Zaugg JB. de Teresa-Trueba I, et al. Among authors: pape c. Nat Methods. 2023 Feb;20(2):284-294. doi: 10.1038/s41592-022-01746-2. Epub 2023 Jan 23. Nat Methods. 2023. PMID: 36690741 Free PMC article.
Volume electron microscopy.
Peddie CJ, Genoud C, Kreshuk A, Meechan K, Micheva KD, Narayan K, Pape C, Parton RG, Schieber NL, Schwab Y, Titze B, Verkade P, Aubrey A, Collinson LM. Peddie CJ, et al. Among authors: pape c. Nat Rev Methods Primers. 2022 Jul 7;2:51. doi: 10.1038/s43586-022-00131-9. Nat Rev Methods Primers. 2022. PMID: 37409324 Free PMC article.
Multicut brings automated neurite segmentation closer to human performance.
Beier T, Pape C, Rahaman N, Prange T, Berg S, Bock DD, Cardona A, Knott GW, Plaza SM, Scheffer LK, Koethe U, Kreshuk A, Hamprecht FA. Beier T, et al. Among authors: pape c. Nat Methods. 2017 Jan 31;14(2):101-102. doi: 10.1038/nmeth.4151. Nat Methods. 2017. PMID: 28139671 No abstract available.
Accurate and versatile 3D segmentation of plant tissues at cellular resolution.
Wolny A, Cerrone L, Vijayan A, Tofanelli R, Barro AV, Louveaux M, Wenzl C, Strauss S, Wilson-Sánchez D, Lymbouridou R, Steigleder SS, Pape C, Bailoni A, Duran-Nebreda S, Bassel GW, Lohmann JU, Tsiantis M, Hamprecht FA, Schneitz K, Maizel A, Kreshuk A. Wolny A, et al. Among authors: pape c. Elife. 2020 Jul 29;9:e57613. doi: 10.7554/eLife.57613. Elife. 2020. PMID: 32723478 Free PMC article.
Microscopy-based assay for semi-quantitative detection of SARS-CoV-2 specific antibodies in human sera: A semi-quantitative, high throughput, microscopy-based assay expands existing approaches to measure SARS-CoV-2 specific antibody levels in human sera.
Pape C, Remme R, Wolny A, Olberg S, Wolf S, Cerrone L, Cortese M, Klaus S, Lucic B, Ullrich S, Anders-Össwein M, Wolf S, Cerikan B, Neufeldt CJ, Ganter M, Schnitzler P, Merle U, Lusic M, Boulant S, Stanifer M, Bartenschlager R, Hamprecht FA, Kreshuk A, Tischer C, Kräusslich HG, Müller B, Laketa V. Pape C, et al. Bioessays. 2021 Mar;43(3):e2000257. doi: 10.1002/bies.202000257. Epub 2020 Dec 30. Bioessays. 2021. PMID: 33377226 Free PMC article.
80 results