Palermo G - Search Results

1

Frontiers of metal-coordinating drug design.

Palermo G, Spinello A, Saha A, Magistrato A. Palermo G, et al. Expert Opin Drug Discov. 2021 May;16(5):497-511. doi: 10.1080/17460441.2021.1851188. Epub 2020 Dec 1. Expert Opin Drug Discov. 2021. PMID: 33874825 Free PMC article. Review.

2

Fighting Cancer with Transition Metal Complexes: From Naked DNA to Protein and Chromatin Targeting Strategies.

Palermo G, Magistrato A, Riedel T, von Erlach T, Davey CA, Dyson PJ, Rothlisberger U. Palermo G, et al. ChemMedChem. 2016 Jun 20;11(12):1199-210. doi: 10.1002/cmdc.201500478. Epub 2015 Dec 4. ChemMedChem. 2016. PMID: 26634638 Free PMC article. Review.

3

Who Activates the Nucleophile in Ribozyme Catalysis? An Answer from the Splicing Mechanism of Group II Introns.

Casalino L, Palermo G, Rothlisberger U, Magistrato A. Casalino L, et al. Among authors: palermo g. J Am Chem Soc. 2016 Aug 24;138(33):10374-7. doi: 10.1021/jacs.6b01363. Epub 2016 Jun 23. J Am Chem Soc. 2016. PMID: 27309711

4

Development of Site-Specific Mg(2+)-RNA Force Field Parameters: A Dream or Reality? Guidelines from Combined Molecular Dynamics and Quantum Mechanics Simulations.

Casalino L, Palermo G, Abdurakhmonova N, Rothlisberger U, Magistrato A. Casalino L, et al. Among authors: palermo g. J Chem Theory Comput. 2017 Jan 10;13(1):340-352. doi: 10.1021/acs.jctc.6b00905. Epub 2016 Dec 21. J Chem Theory Comput. 2017. PMID: 28001405

5

All-atom simulations disentangle the functional dynamics underlying gene maturation in the intron lariat spliceosome.

Casalino L, Palermo G, Spinello A, Rothlisberger U, Magistrato A. Casalino L, et al. Among authors: palermo g. Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6584-6589. doi: 10.1073/pnas.1802963115. Epub 2018 Jun 11. Proc Natl Acad Sci U S A. 2018. PMID: 29891649 Free PMC article.

6

Understanding the mechanistic basis of non-coding RNA through molecular dynamics simulations.

Palermo G, Casalino L, Magistrato A, Andrew McCammon J. Palermo G, et al. J Struct Biol. 2019 Jun 1;206(3):267-279. doi: 10.1016/j.jsb.2019.03.004. Epub 2019 Mar 15. J Struct Biol. 2019. PMID: 30880083 Free PMC article. Review.

7

Disclosing the Impact of Carcinogenic SF3b Mutations on Pre-mRNA Recognition Via All-Atom Simulations.

Borišek J, Saltalamacchia A, Gallì A, Palermo G, Molteni E, Malcovati L, Magistrato A. Borišek J, et al. Among authors: palermo g. Biomolecules. 2019 Oct 21;9(10):633. doi: 10.3390/biom9100633. Biomolecules. 2019. PMID: 31640290 Free PMC article.

8

Molecular Dynamics Reveals a DNA-Induced Dynamic Switch Triggering Activation of CRISPR-Cas12a.

Saha A, Arantes PR, Hsu RV, Narkhede YB, Jinek M, Palermo G. Saha A, et al. Among authors: palermo g. J Chem Inf Model. 2020 Dec 28;60(12):6427-6437. doi: 10.1021/acs.jcim.0c00929. Epub 2020 Oct 27. J Chem Inf Model. 2020. PMID: 33107304 Free PMC article.

9

Fighting COVID-19 Using Molecular Dynamics Simulations.

Arantes PR, Saha A, Palermo G. Arantes PR, et al. Among authors: palermo g. ACS Cent Sci. 2020 Oct 28;6(10):1654-1656. doi: 10.1021/acscentsci.0c01236. Epub 2020 Oct 12. ACS Cent Sci. 2020. PMID: 33140032 Free PMC article. No abstract available.

10

Establishing the allosteric mechanism in CRISPR-Cas9.

Nierzwicki Ł, Arantes PR, Saha A, Palermo G. Nierzwicki Ł, et al. Among authors: palermo g. Wiley Interdiscip Rev Comput Mol Sci. 2021 May-Jun;11(3):e1503. doi: 10.1002/wcms.1503. Epub 2020 Oct 26. Wiley Interdiscip Rev Comput Mol Sci. 2021. PMID: 34322166 Free PMC article.

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