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ShapeMetrics: A userfriendly pipeline for 3D cell segmentation and spatial tissue analysis.
Dev Biol. 2020 Jun 1;462(1):7-19. doi: 10.1016/j.ydbio.2020.02.003. Epub 2020 Feb 14.
Dev Biol. 2020.
PMID: 32061886
Free PMC article.
Caspase-2 and p75 neurotrophin receptor (p75NTR) are involved in the regulation of SREBP and lipid genes in hepatocyte cells.
Pham DD, Bruelle C, Thi Do H, Pajanoja C, Jin C, Srinivasan V, Olkkonen VM, Eriksson O, Jauhiainen M, Lalowski M, Lindholm D.
Pham DD, et al. Among authors: pajanoja c.
Cell Death Dis. 2019 Jul 11;10(7):537. doi: 10.1038/s41419-019-1758-z.
Cell Death Dis. 2019.
PMID: 31296846
Free PMC article.
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PGC-1α Signaling Increases GABA(A) Receptor Subunit α2 Expression, GABAergic Neurotransmission and Anxiety-Like Behavior in Mice.
Vanaveski T, Molchanova S, Pham DD, Schäfer A, Pajanoja C, Narvik J, Srinivasan V, Urb M, Koivisto M, Vasar E, Timmusk T, Minkeviciene R, Eriksson O, Lalowski M, Taira T, Korhonen L, Voikar V, Lindholm D.
Vanaveski T, et al. Among authors: pajanoja c.
Front Mol Neurosci. 2021 Feb 1;14:588230. doi: 10.3389/fnmol.2021.588230. eCollection 2021.
Front Mol Neurosci. 2021.
PMID: 33597848
Free PMC article.
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Neurotrophin receptor Ntrk2b function in the maintenance of dopamine and serotonin neurons in zebrafish.
Sahu MP, Pazos-Boubeta Y, Pajanoja C, Rozov S, Panula P, Castrén E.
Sahu MP, et al. Among authors: pajanoja c.
Sci Rep. 2019 Feb 14;9(1):2036. doi: 10.1038/s41598-019-39347-3.
Sci Rep. 2019.
PMID: 30765816
Free PMC article.
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Maintenance of pluripotency-like signature in the entire ectoderm leads to neural crest stem cell potential.
Pajanoja C, Hsin J, Olinger B, Schiffmacher A, Yazejian R, Abrams S, Dapkunas A, Zainul Z, Doyle AD, Martin D, Kerosuo L.
Pajanoja C, et al.
Nat Commun. 2023 Sep 23;14(1):5941. doi: 10.1038/s41467-023-41384-6.
Nat Commun. 2023.
PMID: 37741818
Free PMC article.
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ShapeMetrics: A 3D Cell Segmentation Pipeline for Single-Cell Spatial Morphometric Analysis.
Pajanoja C, Kerosuo L.
Pajanoja C, et al.
Methods Mol Biol. 2024;2767:263-273. doi: 10.1007/7651_2023_489.
Methods Mol Biol. 2024.
PMID: 37219813
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Maintenance of pluripotency in the entire ectoderm enables neural crest formation.
Pajanoja C, Hsin J, Olinger B, Schiffmacher A, Abrams S, Dapkunas A, Zainul Z, Doyle AD, Martin D, Kerosuo L.
Pajanoja C, et al.
Res Sq [Preprint]. 2023 Jan 25:rs.3.rs-2285117. doi: 10.21203/rs.3.rs-2285117/v1.
Res Sq. 2023.
PMID: 36747797
Free PMC article.
Updated.
Preprint.
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