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Use of a Pan-Genomic DNA Microarray in Determination of the Phylogenetic Relatedness among Cronobacter spp. and Its Use as a Data Mining Tool to Understand Cronobacter Biology.
Tall BD, Gangiredla J, Grim CJ, Patel IR, Jackson SA, Mammel MK, Kothary MH, Sathyamoorthy V, Carter L, Fanning S, Iversen C, Pagotto F, Stephan R, Lehner A, Farber J, Yan QQ, Gopinath GR. Tall BD, et al. Among authors: pagotto f. Microarrays (Basel). 2017 Mar 4;6(1):6. doi: 10.3390/microarrays6010006. Microarrays (Basel). 2017. PMID: 28273858 Free PMC article. Review.
Pan-genome analysis of the emerging foodborne pathogen Cronobacter spp. suggests a species-level bidirectional divergence driven by niche adaptation.
Grim CJ, Kotewicz ML, Power KA, Gopinath G, Franco AA, Jarvis KG, Yan QQ, Jackson SA, Sathyamoorthy V, Hu L, Pagotto F, Iversen C, Lehner A, Stephan R, Fanning S, Tall BD. Grim CJ, et al. Among authors: pagotto f. BMC Genomics. 2013 May 31;14:366. doi: 10.1186/1471-2164-14-366. BMC Genomics. 2013. PMID: 23724777 Free PMC article.
Development of a Custom-Designed, Pan Genomic DNA Microarray to Characterize Strain-Level Diversity among Cronobacter spp.
Tall BD, Gangiredla J, Gopinath GR, Yan Q, Chase HR, Lee B, Hwang S, Trach L, Park E, Yoo Y, Chung T, Jackson SA, Patel IR, Sathyamoorthy V, Pava-Ripoll M, Kotewicz ML, Carter L, Iversen C, Pagotto F, Stephan R, Lehner A, Fanning S, Grim CJ. Tall BD, et al. Among authors: pagotto f. Front Pediatr. 2015 Apr 30;3:36. doi: 10.3389/fped.2015.00036. eCollection 2015. Front Pediatr. 2015. PMID: 25984509 Free PMC article.
A proposed harmonized LPS molecular-subtyping scheme for Cronobacter species.
Yan Q, Jarvis KG, Chase HR, Hébert K, Trach LH, Lee C, Sadowski J, Lee B, Hwang S, Sathyamoorthy V, Mullane N, Pava-Ripoll M, Iversen C, Pagotto F, Fanning S, Tall BD. Yan Q, et al. Among authors: pagotto f. Food Microbiol. 2015 Sep;50:38-43. doi: 10.1016/j.fm.2015.03.003. Epub 2015 Mar 17. Food Microbiol. 2015. PMID: 25998813
Analysis of the Molecular Diversity Among Cronobacter Species Isolated From Filth Flies Using Targeted PCR, Pan Genomic DNA Microarray, and Whole Genome Sequencing Analyses.
Jang H, Chase HR, Gangiredla J, Grim CJ, Patel IR, Kothary MH, Jackson SA, Mammel MK, Carter L, Negrete F, Finkelstein S, Weinstein L, Yan Q, Iversen C, Pagotto F, Stephan R, Lehner A, Eshwar AK, Fanning S, Farber J, Gopinath GR, Tall BD, Pava-Ripoll M. Jang H, et al. Among authors: pagotto f. Front Microbiol. 2020 Sep 25;11:561204. doi: 10.3389/fmicb.2020.561204. eCollection 2020. Front Microbiol. 2020. PMID: 33101235 Free PMC article.
Phylogenomic Analysis of Salmonella enterica subsp. enterica Serovar Bovismorbificans from Clinical and Food Samples Using Whole Genome Wide Core Genes and kmer Binning Methods to Identify Two Distinct Polyphyletic Genome Pathotypes.
Gopinath GR, Jang H, Beaubrun JJ, Gangiredla J, Mammel MK, Müller A, Tamber S, Patel IR, Ewing L, Weinstein LM, Wang CZ, Finkelstein S, Negrete F, Muruvanda T, Allard M, Sockett DC, Pagotto F, Tall BD, Stephan R. Gopinath GR, et al. Among authors: pagotto f. Microorganisms. 2022 Jun 11;10(6):1199. doi: 10.3390/microorganisms10061199. Microorganisms. 2022. PMID: 35744717 Free PMC article.
Surveillance for Listeria monocytogenes and listeriosis, 1995-2004.
Clark CG, Farber J, Pagotto F, Ciampa N, Doré K, Nadon C, Bernard K, Ng LK; CPHLN. Clark CG, et al. Among authors: pagotto f. Epidemiol Infect. 2010 Apr;138(4):559-72. doi: 10.1017/S0950268809990914. Epub 2009 Oct 12. Epidemiol Infect. 2010. PMID: 19818199
77 results